The complete genome sequences of Bacillus velezensis B26: a promising biocontrol agent and biofertilizer.

Q2 Pharmacology, Toxicology and Pharmaceutics
F1000Research Pub Date : 2025-07-08 eCollection Date: 2025-01-01 DOI:10.12688/f1000research.160546.2
Venkatesh Kamath B, Sandeep Mallya, Subrahmanyam Volety Mallikarjuna, Kiran Kumar Kolathur
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引用次数: 0

Abstract

Bacillus velezensis, is a bacterium widely recognized for its biocontrol properties and ability to promote plant growth. This study presents the whole genome sequence of B. velezensis B26, a newly identified strain isolated from chicken carcass soil, Udupi, India. The bacterium showed strong activity against fungal pathogens and exhibited diverse enzymatic activities. The whole genome sequencing was executed using Illumina technologies. Assembly revealed that strain B26 possesses a genome of 3,946,698-bp with a G+C content of 46.3%. Genome annotation identified 3776 protein-coding genes, 1 rRNA gene, 50 tRNA genes, 5 ncRNA genes, and 59 pseudogenes. Functional analysis of the B. velezensis B26 genome revealed 216 genes involved in carbohydrate metabolism, 3 genes in potassium metabolism, 148 genes linked for cofactors, vitamins, prosthetic groups and pigments, 10 genes involved in phosphorus metabolism, 24 genes associated with iron acquisition and metabolism, 20 genes for nitrogen metabolism, 6 genes involved in sulfur metabolism, 6 genes in secondary metabolism, 12 genes associated with metabolism of aromatic compounds, 43 genes involved in stress response and 36 genes associated with virulence, disease and defense. The raw sequence data generated in this work has been deposited in the NCBI database and the genome sequence is available under the accession number JAYKOV000000000. This genomic data provides insight into the biocontrol ability and plant-growth promoting capabilities of B. velezensis B26.

一种很有前途的生物防治剂和生物肥料——芽孢杆菌B26的全基因组序列。
velezensis是一种因其生物防治特性和促进植物生长的能力而被广泛认可的细菌。本研究报道了从印度Udupi鸡胴体土壤中分离到的一种新发现菌株B. velezensis B26的全基因组序列。该菌具有较强的抗真菌活性,并表现出多种酶活性。全基因组测序采用Illumina技术。测序结果显示,菌株B26基因组全长3,946,698 bp, G+C含量为46.3%。基因组注释鉴定出3776个蛋白质编码基因、1个rRNA基因、50个tRNA基因、5个ncRNA基因和59个假基因。对白螺旋藻B26基因组的功能分析显示,216个基因参与碳水化合物代谢,3个基因参与钾代谢,148个基因与辅助因子、维生素、假体和色素相关,10个基因参与磷代谢,24个基因与铁获取和代谢相关,20个基因与氮代谢相关,6个基因参与硫代谢,6个基因参与次生代谢,12个基因与芳香化合物代谢相关。43个基因参与应激反应,36个基因与毒力、疾病和防御有关。本工作产生的原始序列数据已存入NCBI数据库,基因组序列登录号为JAYKOV000000000。这些基因组数据有助于深入了解白僵菌B26的生物防治能力和促进植物生长的能力。
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来源期刊
F1000Research
F1000Research Pharmacology, Toxicology and Pharmaceutics-Pharmacology, Toxicology and Pharmaceutics (all)
CiteScore
5.00
自引率
0.00%
发文量
1646
审稿时长
1 weeks
期刊介绍: F1000Research publishes articles and other research outputs reporting basic scientific, scholarly, translational and clinical research across the physical and life sciences, engineering, medicine, social sciences and humanities. F1000Research is a scholarly publication platform set up for the scientific, scholarly and medical research community; each article has at least one author who is a qualified researcher, scholar or clinician actively working in their speciality and who has made a key contribution to the article. Articles must be original (not duplications). All research is suitable irrespective of the perceived level of interest or novelty; we welcome confirmatory and negative results, as well as null studies. F1000Research publishes different type of research, including clinical trials, systematic reviews, software tools, method articles, and many others. Reviews and Opinion articles providing a balanced and comprehensive overview of the latest discoveries in a particular field, or presenting a personal perspective on recent developments, are also welcome. See the full list of article types we accept for more information.
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