Proteomic Analysis of the Extracellular Matrix in the Porcine Adrenal Cortex

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Jean Lucas Kremer, Henrique Sanchez Ortega, Talita Souza-Siqueira, Claudia Blanes Angeli, Leo Kei Iwai, Giuseppe Palmisano and Claudimara Ferini Pacicco Lotfi*, 
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引用次数: 0

Abstract

The extracellular matrix (ECM) is a complex network of proteins that provides structural support and influences tissue boundaries, biomechanical properties, and cell polarity. This study analyzed the ECM profile of the porcine adrenal cortex’s outer (OF = capsule + subcapsular + zona glomerulosa cells) and inner fractions (IF = zona fasciculata cells). Proteomic analysis of decellularized OF and IF samples identified 940 proteins, 27 collagens, 44 ECM glycoproteins, 9 proteoglycans, 20 ECM regulators, 5 ECM-associated proteins, 6 secreted factors, and 39 ECM candidates to compose the specific porcine adrenal matrisome. Among the ECM proteins identified, 113 are common to the OF and IF, while 16 were identified only in the OF and 21 in the IF. The analysis of protein abundance differences showed three proteins (Lamc1, Perlecan, and Tgm2) significantly abundant in OF compared to IF. In IF, 11 proteins (Col1α1, Col1α2, Col6α1, Col6α2, Col6α3, Col6α6, Col14α1, Ecm1, Fga, Fgb, and Fgg) were more abundant than OF. The comparative analysis of the quantification ECM proteins from the decellularized adrenal cortex of rats, humans, and pigs showed that in porcine samples, the ECM-quantified proteins are more abundant in the IF, while in rats and human samples, the more abundant ECM-quantified proteins are in the OF. These findings provide valuable insights into the potential of using pigs as a biomedical model and an essential tool for translational medical research.

猪肾上腺皮质细胞外基质的蛋白质组学分析。
细胞外基质(ECM)是一个复杂的蛋白质网络,提供结构支持并影响组织边界、生物力学特性和细胞极性。本研究分析了猪肾上腺皮质外(of =被囊+被囊下+肾小球带细胞)和内(IF =束状带细胞)的ECM谱。对脱细胞of和IF样品进行蛋白质组学分析,鉴定出940种蛋白、27种胶原蛋白、44种ECM糖蛋白、9种蛋白聚糖、20种ECM调节蛋白、5种ECM相关蛋白、6种分泌因子和39种ECM候选蛋白组成特异性的猪肾上腺基质体。在已鉴定的ECM蛋白中,113个与OF和IF共有,16个仅在OF中被鉴定,21个在IF中被鉴定。蛋白质丰度差异分析显示,与IF相比,of中有3种蛋白质(Lamc1、Perlecan和Tgm2)显著丰富。在IF中,Col1α1、Col1α2、Col6α1、Col6α2、Col6α3、Col6α6、Col14α1、Ecm1、Fga、Fgb、Fgg等11种蛋白的丰度高于OF。对大鼠、人和猪去细胞肾上腺皮质的ECM定量蛋白进行对比分析,发现猪样品中,ECM定量蛋白在IF中含量更高,而在大鼠和人样品中,ECM定量蛋白在of中含量更高。这些发现为利用猪作为生物医学模型和转化医学研究的重要工具的潜力提供了有价值的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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