A Nomogram Combining Two Novel Biomarkers for Predicting Lung Adenocarcinoma in Ground-Glass Nodule Patients

IF 3.3 2区 医学 Q2 GENETICS & HEREDITY
Yameng Li, Qingxian Zhang
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引用次数: 0

Abstract

Objective: Combination of CT imaging and RNA sequencing techniques was used to explore the potential biomarkers specific to lung adenocarcinoma within pulmonary ground-glass nodules.

Method: The imaging and pathological data of patients with pulmonary ground-glass nodules who underwent chest CT scanning were confirmed through surgical procedures. Based on the pathological results, the patients were categorized into a benign nodule group and a malignant nodule group. Subsequently, RNA sequencing was conducted to analyze gene expression information in the pulmonary ground-glass nodules of these 16 patients.

Results: CT signs demonstrated statistical significance in both benign and malignant nodules. A total of 2080 upregulated genes and 1240 downregulated genes were identified through RNA sequencing in malignant nodules compared to benign nodules. CST1 exhibited increased expression among the upregulated genes in lung adenocarcinoma tissues compared to lung tissues. Among the downregulated genes, only GIMAP1-GIMAP5 showed decreased expression in lung adenocarcinoma tissues. Finally, we validated the clinical significance of CST1 and GIMAP1-GIMAP5 in patients with lung adenocarcinoma, particularly highlighting a strong correlation between GIMAP1-GIMAP5 expression levels and prognosis for patients. A visual nomogram predictive model for pulmonary ground-glass nodules was constructed (area under the receiver operating characteristic curve (AUC) > 0.8).

Conclusion: We constructed a nomogram combining CST1 and GIMAP1-GIMAP5 expression for predicting lung adenocarcinoma in ground-glass nodules in the context of COVID-19. This nomogram addresses the unique diagnostic challenges posed by COVID-19, where overlapping pulmonary imaging findings between viral pneumonia and early lung cancer necessitate robust molecular-aided discrimination.

结合两种新的生物标志物预测磨玻璃结节患者肺腺癌的Nomogram
目的:结合CT成像和RNA测序技术,探讨肺毛玻璃结节内潜在的肺腺癌特异性生物标志物。方法:对经胸部CT扫描的肺磨玻璃结节患者的影像学和病理资料进行手术确认。根据病理结果将患者分为良性结节组和恶性结节组。随后,对这16例肺磨玻璃结节进行RNA测序,分析其基因表达信息。结果:良、恶性结节的CT征象均有统计学意义。与良性结节相比,通过RNA测序在恶性结节中共鉴定出2080个上调基因和1240个下调基因。与肺组织相比,CST1在肺腺癌组织中的上调基因表达增加。在下调的基因中,只有GIMAP1-GIMAP5在肺腺癌组织中表达降低。最后,我们验证了CST1和GIMAP1-GIMAP5在肺腺癌患者中的临床意义,特别强调了GIMAP1-GIMAP5表达水平与患者预后的强相关性。建立了肺磨玻璃结节的视觉图预测模型(受者工作特征曲线下面积(AUC));0.8)。结论:我们构建了CST1与GIMAP1-GIMAP5联合表达的nomogram预测2019冠状病毒病背景下磨玻璃结节肺腺癌。该图解决了COVID-19带来的独特诊断挑战,其中病毒性肺炎和早期肺癌之间重叠的肺部影像学发现需要强有力的分子辅助鉴别。
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来源期刊
Human Mutation
Human Mutation 医学-遗传学
CiteScore
8.40
自引率
5.10%
发文量
190
审稿时长
2 months
期刊介绍: Human Mutation is a peer-reviewed journal that offers publication of original Research Articles, Methods, Mutation Updates, Reviews, Database Articles, Rapid Communications, and Letters on broad aspects of mutation research in humans. Reports of novel DNA variations and their phenotypic consequences, reports of SNPs demonstrated as valuable for genomic analysis, descriptions of new molecular detection methods, and novel approaches to clinical diagnosis are welcomed. Novel reports of gene organization at the genomic level, reported in the context of mutation investigation, may be considered. The journal provides a unique forum for the exchange of ideas, methods, and applications of interest to molecular, human, and medical geneticists in academic, industrial, and clinical research settings worldwide.
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