Resolving Artifacts in Voltage-Clamp Experiments with Computational Modeling: An Application to Fast Sodium Current Recordings.

IF 14.3 1区 材料科学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Chon Lok Lei, Alexander P Clark, Michael Clerx, Siyu Wei, Meye Bloothooft, Teun P de Boer, David J Christini, Trine Krogh-Madsen, Gary R Mirams
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引用次数: 0

Abstract

Cellular electrophysiology underpins fields from basic science in neurology, cardiology, and oncology to safety critical applications for drug safety testing, risk assessment of rare mutations, and models based on cellular electrophysiology data even guide clinical interventions. Patch-clamp voltage clamp is the gold standard for measuring ionic current dynamics that explain cellular electrophysiology, but recordings can be influenced by artifacts introduced by the measurement process. A computational approach is developed, validated through electrical model cell experiments, to explain and predict intricate artifacts in voltage-clamp experiments. Applied to various cardiac fast sodium current measurements, the model resolved artifacts in the experiments by coupling observed current with simulated membrane voltage, explaining some typically observed shifts and delays in recorded currents. It is shown that averaging data for current-voltage relationships can introduce biases comparable to effect sizes reported for disease-causing mutations. The computational pipeline provides improved assessment and interpretation of voltage-clamp experiments, correcting, and enhancing understanding of ion channel behavior.

用计算模型解决电压钳实验中的伪影:在快速钠电流记录中的应用。
细胞电生理学支撑着从神经病学、心脏病学和肿瘤学的基础科学到药物安全测试、罕见突变风险评估的安全关键应用,以及基于细胞电生理学数据的模型,甚至指导临床干预。膜片钳电压钳是测量解释细胞电生理的离子电流动力学的金标准,但记录可能受到测量过程中引入的伪影的影响。开发了一种计算方法,并通过电模型细胞实验验证,以解释和预测电压钳实验中复杂的伪影。应用于各种心脏快速钠电流测量,该模型通过将观察电流与模拟膜电压耦合来解决实验中的伪影,解释了记录电流中一些典型的观察位移和延迟。研究表明,对电流-电压关系的平均数据可以引入与致病突变报告的效应大小相当的偏差。计算管道提供了改进的评估和解释电压钳实验,纠正,并加强对离子通道行为的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Advanced Science
Advanced Science CHEMISTRY, MULTIDISCIPLINARYNANOSCIENCE &-NANOSCIENCE & NANOTECHNOLOGY
CiteScore
18.90
自引率
2.60%
发文量
1602
审稿时长
1.9 months
期刊介绍: Advanced Science is a prestigious open access journal that focuses on interdisciplinary research in materials science, physics, chemistry, medical and life sciences, and engineering. The journal aims to promote cutting-edge research by employing a rigorous and impartial review process. It is committed to presenting research articles with the highest quality production standards, ensuring maximum accessibility of top scientific findings. With its vibrant and innovative publication platform, Advanced Science seeks to revolutionize the dissemination and organization of scientific knowledge.
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