Deep learning model applied to real-time delineation of colorectal polyps.

IF 3.3 3区 医学 Q2 MEDICAL INFORMATICS
Moana Gelu-Simeon, Adel Mamou, Georgette Saint-Georges, Marceline Alexis, Marie Sautereau, Yassine Mamou, Jimmy Simeon
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引用次数: 0

Abstract

Background: Deep learning models have shown considerable potential to improve diagnostic accuracy across medical fields. Although YOLACT has demonstrated real-time detection and segmentation in non-medical datasets, its application in medical settings remains underexplored. This study evaluated the performance of a YOLACT-derived Real-time Polyp Delineation Model (RTPoDeMo) for real-time use on prospectively recorded colonoscopy videos.

Methods: Twelve combinations of architectures, including Mask-RCNN, YOLACT, and YOLACT++, paired with backbones such as ResNet50, ResNet101, and DarkNet53, were tested on 2,188 colonoscopy images with three image resolution sizes. Dataset preparation involved pre-processing and segmentation annotation, with optimized image augmentation.

Results: RTPoDeMo, using YOLACT-ResNet50, achieved 72.3 mAP and 32.8 FPS for real-time instance segmentation based on COCO annotations. The model performed with a per-image accuracy of 99.59% (95% CI: [99.45 - 99.71%]), sensitivity of 90.63% (95% CI: [78.95 - 93.64%]), specificity of 99.95% (95% CI: [99.93 - 99.97%]) and a F1-score of 0.94 (95% CI: [0.87-0.98]). In validation, out of 36 polyps detected by experts, RTPoDeMo missed only one polyp, compared to six missed by senior endoscopists. The model demonstrated good agreement with experts, reflected by a Cohen's Kappa coefficient of 0.72 (95% CI: [0.54-1.00], p < 0.0001).

Conclusions: Our model provides new perspectives in the adaptation of YOLACT to the real-time delineation of colorectal polyps. In the future, it could improve the characterization of polyps to be resected during colonoscopy.

应用深度学习模型实时描绘结直肠息肉。
背景:深度学习模型在提高医学领域的诊断准确性方面显示出相当大的潜力。尽管YOLACT已经在非医疗数据集中展示了实时检测和分割,但其在医疗环境中的应用仍未得到充分探索。本研究评估了yolact衍生的实时息肉描绘模型(RTPoDeMo)在前瞻性结肠镜检查视频中实时使用的性能。方法:采用Mask-RCNN、YOLACT、YOLACT++等12种架构组合,与ResNet50、ResNet101、DarkNet53等骨干网配对,在2188张不同分辨率的结肠镜图像上进行测试。数据集准备包括预处理和分割标注,优化图像增强。结果:RTPoDeMo使用YOLACT-ResNet50进行基于COCO标注的实时实例分割,mAP达到72.3,FPS达到32.8。该模型的单幅图像准确率为99.59% (95% CI:[99.45 - 99.71%]),灵敏度为90.63% (95% CI:[78.95 - 93.64%]),特异性为99.95% (95% CI: [99.93 - 99.97%]), f1评分为0.94 (95% CI:[0.87-0.98])。在验证中,在专家检测到的36个息肉中,RTPoDeMo只遗漏了一个息肉,而资深内窥镜医生遗漏了6个。Cohen’s Kappa系数为0.72 (95% CI:[0.54-1.00])。结论:我们的模型为YOLACT适应结肠直肠息肉的实时描绘提供了新的视角。在未来,它可以改善在结肠镜检查中切除的息肉的特征。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
7.20
自引率
5.70%
发文量
297
审稿时长
1 months
期刊介绍: BMC Medical Informatics and Decision Making is an open access journal publishing original peer-reviewed research articles in relation to the design, development, implementation, use, and evaluation of health information technologies and decision-making for human health.
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