Transfer learning for COVID-19 predictive modeling: A multicenter study of 12 hospitals

IF 3 3区 医学 Q1 PUBLIC, ENVIRONMENTAL & OCCUPATIONAL HEALTH
Carine Savalli , André Henrique Alves Carneiro , Fabiano Barcellos Filho , Murilo Afonso Robiati Bigoto , Roberta Moreira Wichmann , Alexandre Dias Porto Chiavegatto Filho , on behalf of IACOV-BR Network
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引用次数: 0

Abstract

Purpose

To use transfer learning to predict Intensive Care Unit admission (ICU) for COVID-19 patients in a multicenter setting.

Methods

We trained XGBoost algorithms using demographic and laboratory predictors recorded during hospital admissions across 12 hospitals. Our goal was to identify the best-performing hospital and evaluate its generalization capacity through external validation in the other 11 hospitals. Additionally, this best-performing hospital served as the source domain for transfer learning and was fine-tuned by incorporating new decision trees trained with local data from each of the remaining hospitals.

Results

We observed considerable variation in ICU admission outcomes across the 12 hospitals, with local predictive performance (AUC – area under the receiver operating characteristic curve) ranging from 0.6239 to 0.9410. The best-performing model's generalization capacity, evaluated through external validation, resulted in an AUC below 0.7 in 6 hospitals. By applying transfer learning and fine-tuning this best-performing model, we found that its performance stabilized after incorporating 20 new trees trained with data from the target hospitals. This adjustment improved AUC in 9 out of the 11 hospitals, compared to the results from the external validation.

Conclusions

The study showed that transfer learning effectively leverages knowledge from the best-performing hospital to initialize and accelerate model training in other hospitals with lower performance or limited sample sizes, thereby enhancing overall adaptability and efficiency.
基于迁移学习的COVID-19预测建模:12家医院的多中心研究
目的应用迁移学习预测多中心环境下COVID-19患者重症监护病房(ICU)入院时间。方法我们使用12家医院住院期间记录的人口统计学和实验室预测指标来训练XGBoost算法。我们的目标是找出表现最好的医院,并通过其他11家医院的外部验证来评估其推广能力。此外,这家表现最好的医院作为迁移学习的源域,并通过合并新的决策树来进行微调,这些决策树经过了来自其余医院的本地数据的训练。结果12家医院ICU住院结果差异较大,局部预测性能(AUC -受试者工作特征曲线下面积)范围为0.6239 ~ 0.9410。通过外部验证评估,表现最好的模型的泛化能力导致6家医院的AUC低于0.7。通过应用迁移学习和微调这个表现最好的模型,我们发现,在纳入了来自目标医院的数据训练的20个新树之后,它的性能稳定了。与外部验证的结果相比,这一调整改善了11家医院中9家的AUC。结论研究表明,迁移学习可以有效地利用表现最好的医院的知识,对其他表现较差或样本量有限的医院进行初始化和加速模型训练,从而提高整体适应性和效率。
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来源期刊
Annals of Epidemiology
Annals of Epidemiology 医学-公共卫生、环境卫生与职业卫生
CiteScore
7.40
自引率
1.80%
发文量
207
审稿时长
59 days
期刊介绍: The journal emphasizes the application of epidemiologic methods to issues that affect the distribution and determinants of human illness in diverse contexts. Its primary focus is on chronic and acute conditions of diverse etiologies and of major importance to clinical medicine, public health, and health care delivery.
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