Identifying causal genes for prostatitis through drug-targeted Mendelian randomization.

IF 3.9 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Kun Yan, Yifang Tao, Bohong Chen, Dong Zhang, Zihao Li, Caogang Li, Peng Zhang
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Abstract

Prostatitis is a common condition in andrology and urology that significantly impacts the quality of life of affected individuals. Current treatments often fail to provide lasting benefits. To identify novel therapeutic targets, we conducted a drug-targeted Mendelian randomization (MR) study. Using cis-expression quantitative trait loci (cis-eQTL) data from the eQTLGen Consortium combined with Genome-Wide Association Studies (GWAS) data on prostatitis from FinnGen, we performed a two-sample MR analysis. This analysis identified nine potential causal genes: ANXA1, CRY2, DSTYK, FKBP1A, LAMA5, NENF, PTGIR, STK39, and TGFA. Following heterogeneity testing, horizontal pleiotropy assessment, and bidirectional MR, CRY2 and PTGIR were validated in the Genotype-Tissue Expression (GTEx) portal replication phase. Bayesian colocalization analysis and genetic correlation analysis investigations provided strong evidence of shared causal variants with prostatitis and negative genetic correlations for these genes. PheWAS indicated negligible horizontal pleiotropy, and drug prediction analysis identified potential targeting agents for CRY2 and PTGIR. This study highlights CRY2 and PTGIR as promising therapeutic targets for prostatitis, providing new insights into its genetic underpinnings and offering potential pathways for developing effective treatments.

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通过药物靶向孟德尔随机化确定前列腺炎的致病基因。
前列腺炎是男科和泌尿科的常见疾病,严重影响患者的生活质量。目前的治疗方法往往不能提供持久的益处。为了确定新的治疗靶点,我们进行了一项药物靶向孟德尔随机化(MR)研究。利用来自eQTLGen联盟的顺式表达定量性状位点(cis-eQTL)数据,结合FinnGen的前列腺炎全基因组关联研究(GWAS)数据,我们进行了两样本MR分析。该分析确定了9个潜在的致病基因:ANXA1、CRY2、DSTYK、FKBP1A、LAMA5、NENF、PTGIR、STK39和TGFA。通过异质性检验、水平多效性评估和双向MR, CRY2和PTGIR在基因型-组织表达(GTEx)门户复制阶段得到验证。贝叶斯共定位分析和遗传相关分析调查提供了强有力的证据,证明前列腺炎具有共同的因果变异,这些基因具有负遗传相关性。PheWAS显示水平多效性可以忽略不计,药物预测分析确定了CRY2和PTGIR的潜在靶向药物。这项研究强调了CRY2和PTGIR作为前列腺炎有希望的治疗靶点,为其遗传基础提供了新的见解,并为开发有效的治疗方法提供了潜在的途径。
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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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