Role of Next-Generation Sequencing in Diagnosis of Familial Hypercholesterolemia in Serbia.

IF 3 3区 医学 Q1 MEDICINE, GENERAL & INTERNAL
Sandra Singh Lukac, Vladimir Gasic, Jovana Komazec, Ivana Grubisa, Ljiljana Popovic, Iva Rasulic, Sonja Pavlovic, Katarina Lalic
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引用次数: 0

Abstract

Objectives: Familial hypercholesterolemia (FH) is an autosomal dominant disorder of lipid metabolism characterized by high levels of low-density lipoprotein (LDL). This study aimed to identify variants in the LDLR, APOB, PCSK9 and LDLRAP1 genes and to identify the genotype-phenotype correlation in Serbian FH patients. Method: This study included a total of 101 patients suspected of having FH based on clinical criteria. Genetic analysis was performed by the next-generation sequencing (NGS) method. Results: An overall mutation detection rate of 43.6% was achieved. Thirteen distinct variants were detected in the LDLR gene (93.2%). The most frequently observed variant was c.858C>A p.(Ser286Arg), which was present in 26% of the LDLR-positive patients. Additional variants were detected in the APOB gene. No pathogenic variants were detected in the PCSK9 or LDLRAP1 genes. Comparing genetically FH-positive and FH-negative patients, statistical significance was observed in terms of age (p < 0.001), total cholesterol (TC) (p < 0.001), low-density-lipoprotein cholesterol (LDL-C) (p < 0.001) and triglyceridemia (p < 0.001). Conclusions: This study represents the first insight into the genetic basis of FH in Serbia. Taking into consideration that variants were detected in more than one gene and that the variants in the LDLR gene were distributed across nearly all exons, the FH diagnostics in Serbia ought to be based on NGS methodology.

新一代测序在塞尔维亚家族性高胆固醇血症诊断中的作用。
目的:家族性高胆固醇血症(FH)是一种常染色体显性脂质代谢疾病,其特征是低密度脂蛋白(LDL)水平高。本研究旨在鉴定塞尔维亚FH患者LDLR、APOB、PCSK9和LDLRAP1基因的变异,并确定基因型与表型的相关性。方法:本研究共纳入101例根据临床标准怀疑患有FH的患者。采用新一代测序(NGS)方法进行遗传分析。结果:总体突变检出率为43.6%。LDLR基因有13种不同的变异(93.2%)。最常见的变异是c.858C>A p.(Ser286Arg),在26%的ldlr阳性患者中存在。在APOB基因中检测到其他变异。PCSK9或LDLRAP1基因未检测到致病性变异。fh基因阳性与fh基因阴性患者比较,年龄(p < 0.001)、总胆固醇(p < 0.001)、低密度脂蛋白胆固醇(p < 0.001)、甘油三酯血症(p < 0.001)差异均有统计学意义。结论:这项研究首次深入了解了塞尔维亚FH的遗传基础。考虑到在多个基因中检测到变异,并且LDLR基因的变异分布在几乎所有外显子中,塞尔维亚的FH诊断应该基于NGS方法。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Diagnostics
Diagnostics Biochemistry, Genetics and Molecular Biology-Clinical Biochemistry
CiteScore
4.70
自引率
8.30%
发文量
2699
审稿时长
19.64 days
期刊介绍: Diagnostics (ISSN 2075-4418) is an international scholarly open access journal on medical diagnostics. It publishes original research articles, reviews, communications and short notes on the research and development of medical diagnostics. There is no restriction on the length of the papers. Our aim is to encourage scientists to publish their experimental and theoretical research in as much detail as possible. Full experimental and/or methodological details must be provided for research articles.
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