Anions and citrate inhibit LsAA9A, a lytic polysaccharide monooxygenase (LPMO).

Valerio Di Domenico, Yusuf Theibich, Søren Brander, Jean-Guy Berrin, Katja S Johansen, Kristian E H Frandsen, Leila Lo Leggio
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Abstract

Lytic polysaccharide monooxygenases (LPMOs) are oxidative enzymes that break the glycosidic linkage in recalcitrant polysaccharides such as cellulose and chitin. The LPMO LsAA9A (AA9 family lytic polysaccharide monooxygenase A) from the basidiomycete fungus Lentinus similis is biochemically and structurally well characterized, with crystallographic complexes with oligosaccharides having been obtained. Chloride ions from the crystallization solution are known to bind to the LsAA9A-substrate complex in crystals at the copper equatorial coordinating position, where activation of the co-substrate oxygen species is expected. An investigation of the effect of high concentration salts on LsAA9A activity showed that salts containing chloride and other halide anions, except for fluoride, had a clear inhibitory effect on the activity at concentrations > 100 mm, although chloride ions are known to increase the LPMO affinity for oligosaccharide binding. Surprisingly, LsAA9A crystals can be transferred for short times to considerably different chemical environments, allowing crystallographic analysis at reduced chloride concentrations. Unfortunately, these washing steps do not eliminate the chloride binding at the copper equatorial coordinating position. Furthermore, we observed that citrate buffer, also present, bound under these changed chemical conditions at the copper active site. This interaction completely blocks access to the oligosaccharide substrate and is additionally supported here by citrate inhibition of LsAA9A activities against azurine cross-linked hydroxyethylcellulose (AZCL-HEC), tamarind xyloglucan, and cellopentaose. The conclusions from our study indicate that citrate should be absolutely avoided in LPMO research, not only because of possible abstraction of copper ions from the LPMO active site but also because it might directly compete with binding of LPMOs to their target substrates.

阴离子和柠檬酸抑制多糖单加氧酶LsAA9A。
水解多糖单加氧酶(LPMOs)是一种氧化酶,可以破坏顽固多糖(如纤维素和几丁质)中的糖苷键。从担子真菌香菇中提取的LPMO LsAA9A (AA9家族裂解多糖单加氧酶A)具有良好的生物化学和结构特征,并获得了与低聚糖的晶体结构配合物。已知结晶溶液中的氯离子在铜赤道配位的晶体中与lsaa9a -底物配合物结合,期望在此激活共底物氧。一项关于高浓度盐对LsAA9A活性影响的研究表明,含氯化物和其他卤化物阴离子的盐(氟除外)在浓度为> - 100 mm时对LsAA9A活性有明显的抑制作用,尽管氯离子已知会增加LPMO对低聚糖结合的亲和力。令人惊讶的是,LsAA9A晶体可以在短时间内转移到相当不同的化学环境中,允许在降低氯化物浓度下进行晶体学分析。不幸的是,这些洗涤步骤并不能消除铜赤道配位上的氯离子结合。此外,我们观察到柠檬酸缓冲液也存在,在这些变化的化学条件下结合在铜的活性位点上。这种相互作用完全阻断了低聚糖底物的通路,柠檬酸盐抑制LsAA9A对azurine交联羟乙基纤维素(AZCL-HEC)、罗望子木葡聚糖和纤维素戊糖酶的活性。我们的研究结论表明,在LPMO研究中应该绝对避免使用柠檬酸盐,不仅因为它可能从LPMO活性位点提取铜离子,而且因为它可能直接竞争LPMOs与目标底物的结合。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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