{"title":"A lightweight segmentation model toward timely processing for identification of pine wood nematode affected trees with UAV.","authors":"Qiangjia Wu, Meixiang Chen, Hao Shi, Tongchuan Yi, Gang Xu, Weijia Wang, Ruirui Zhang","doi":"10.1186/s13007-025-01385-6","DOIUrl":null,"url":null,"abstract":"<p><p>Pine wood nematode (PWN), a major international quarantined forest pest, has resulted in significant loss to the pine forest resources, posing a serious threat to global forest ecosystems. Quick and accurate identification of trees infected by PWN can lead to earlier intervention in their spread, thereby significantly reducing losses. However, there is a scarcity of algorithm that are both swift and precise. To achieve more rapid and precise segmentation of trees affected by PWN, we proposed a novel lightweight model termed Refined and Deformable Carafe Attention Net (RCANet). The RCANet excels in both accuracy and real-time performance. It has achieved segmentation accuracy that surpasses mainstream segmentation networks, including DeepLabv3 + , Segformer, PSPNet, HrNet, and UNet. The number of parameters in RCANet is only 5.373 million, the segmentation speed reached 83.14 fps. Compared to the baseline model UNet, the IoU of the affected trees class is improved by 5.6%, and the segmentation speed is accelerated by about 90%. A straightforward yet highly effective lightweight structure was proposed, termed Refined VGG. Additionally, we validate the efficacy of several network modules for this task. RCANet addressed the challenges of low accuracy and inadequate real-time capabilities in the identification of PWN-affected pine trees within intricate forest landscapes. which is expected to be deployed on UAVs in the future for real-time recognition to accelerate the identification and localization of affected trees. This work could facilitate the management of PWN.</p>","PeriodicalId":20100,"journal":{"name":"Plant Methods","volume":"21 1","pages":"68"},"PeriodicalIF":4.7000,"publicationDate":"2025-05-23","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12102842/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Methods","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1186/s13007-025-01385-6","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Pine wood nematode (PWN), a major international quarantined forest pest, has resulted in significant loss to the pine forest resources, posing a serious threat to global forest ecosystems. Quick and accurate identification of trees infected by PWN can lead to earlier intervention in their spread, thereby significantly reducing losses. However, there is a scarcity of algorithm that are both swift and precise. To achieve more rapid and precise segmentation of trees affected by PWN, we proposed a novel lightweight model termed Refined and Deformable Carafe Attention Net (RCANet). The RCANet excels in both accuracy and real-time performance. It has achieved segmentation accuracy that surpasses mainstream segmentation networks, including DeepLabv3 + , Segformer, PSPNet, HrNet, and UNet. The number of parameters in RCANet is only 5.373 million, the segmentation speed reached 83.14 fps. Compared to the baseline model UNet, the IoU of the affected trees class is improved by 5.6%, and the segmentation speed is accelerated by about 90%. A straightforward yet highly effective lightweight structure was proposed, termed Refined VGG. Additionally, we validate the efficacy of several network modules for this task. RCANet addressed the challenges of low accuracy and inadequate real-time capabilities in the identification of PWN-affected pine trees within intricate forest landscapes. which is expected to be deployed on UAVs in the future for real-time recognition to accelerate the identification and localization of affected trees. This work could facilitate the management of PWN.
期刊介绍:
Plant Methods is an open access, peer-reviewed, online journal for the plant research community that encompasses all aspects of technological innovation in the plant sciences.
There is no doubt that we have entered an exciting new era in plant biology. The completion of the Arabidopsis genome sequence, and the rapid progress being made in other plant genomics projects are providing unparalleled opportunities for progress in all areas of plant science. Nevertheless, enormous challenges lie ahead if we are to understand the function of every gene in the genome, and how the individual parts work together to make the whole organism. Achieving these goals will require an unprecedented collaborative effort, combining high-throughput, system-wide technologies with more focused approaches that integrate traditional disciplines such as cell biology, biochemistry and molecular genetics.
Technological innovation is probably the most important catalyst for progress in any scientific discipline. Plant Methods’ goal is to stimulate the development and adoption of new and improved techniques and research tools and, where appropriate, to promote consistency of methodologies for better integration of data from different laboratories.