The nanocomposite materials are highly promising candidates for adsorption applications in dyed wastewater due to their distinctive structural properties. In this work, the nanocomposite hybrids of UiO-66@GO were first synthesized by specifically anchoring Zr-based metal organic framework (MOF) of UiO-66 onto graphene oxide (GO) nanolayer through solvothermal method. Then the composite matrix microspheres (CMMs) of UiO-66@GO were subsequently prepared by embedding the obtained UiO-66@GO nanocomposite into sodium alginate (SA) microspheres through self-assembly cross-linking process. Finally, the prepared UiO-66@GO CMMs were applied for the adsorption of organic dye pollutant and showed efficient water purification performance. As a result, the UiO-66@GO CMMs exhibited selective cationic dye adsorption for Rhodamine B (RhB+). The experimental results revealed that the adsorption kinetics followed by the pseudo-second-order (PSD) model with rate constant k2 = 0.95 × 10–3 g mg−1 min−1, and the thermodynamics followed by the Langmuir model with adsorption capacity of 345.66 mg mg−1. Notably, the UiO-66@GO CMMs demonstrated excellent adsorption removal of a significant removal efficiency of 98% towards 10 ppm Rh-B and a rapid adsorption response time of ~ 5 min. Meanwhile, the UiO-66@GO CMMs maintained long-term stability with adsorption efficiency > 95% over 30 days and effective reuse with resorption efficiency > 90% using DMF-H₂O as eluent. In this study, SA has served as a porous supporting matrix to immobilize UIO-66@GO nanoparticles, having mitigated issues of aggregation and leaching common to nanoscale adsorbents while improving reusability. The synergistic effect between UIO-66 and GO has further enhanced pollutant adsorption capacity, demonstrating significant potential for dye wastewater treatment applications.