Predicting Imminent Conversion to Exudative Age-Related Macular Degeneration Using Multimodal Data and Ensemble Machine Learning

IF 3.2 Q1 OPHTHALMOLOGY
T.Y.Alvin Liu MD , Yuxuan Liu MS , Madeleine S. Gastonguay BS , Dan Midgett PhD , Nathanael Kuo PhD , Yujie Zhao , Kareef Ullah , Gwyneth Alexander , Todd Hartman , Neslihan D. Koseoglu MD , Craig Jones PhD
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引用次数: 0

Abstract

Objective

Exudative age-related macular degeneration (eAMD) is a major cause of central vision loss. Identifying patients at high risk of imminent eAMD could enable timely treatment and improve outcomes. Our goal was to develop and compare classical machine learning (ML) and deep learning (DL) models to predict imminent eAMD conversion within 6 months and integrate OCT with clinical data into a single predictive model.

Design

Retrospective cohort study.

Participants

Patients seen at the Wilmer Eye Institute between 2013 and 2021 with eAMD in ≥1 eye.

Methods

Spectral domain OCT volumes prior to conversion and the corresponding clinical data (age, best-corrected visual acuity, sex, and fellow-eye status) were collected and used for model training or testing. ResNet-50 and classical ML (Random Forest and XGBoost) models were trained to predict imminent conversion to eAMD within 6 months on an eye level. For the multilayer perceptron (MLP) framework, the trained ResNet-50 model was used as the feature encoder, and a downsampled feature vector concatenated with corresponding clinical tabular data was passed through the MLP (prediction head). Data were partitioned at the patient level (75% training, 15% validation, and 10% testing). Model performance was evaluated using the area under the operating characteristic curve (AUC) and 95% confidence interval (CI) for the model AUC was calculated using the percentile method after bootstrapping the test set 10 000 times. Model comparisons were made using modified paired t test. P < 0.05 was considered statistically significant.

Main Outcome Measures

Area under the operating characteristic curve.

Results

Thirty-three thousand one hundred eighty-nine OCT volumes from 2084 patients (63% female; 89.1% White, 4.8% Black, and 2.3% Asian) were included. The mean age at the time of first-eye conversion was 78.9 (± 9.3) years. Our best-performing models, “MLP multimodal” (trained with both OCT and clinical data; AUC: 0.76, 95% CI: 0.71–0.80) and “CNN OCT” (trained with only OCT data; AUC: 0.75, 95% CI: 0.70–0.79), had a DL (ResNet-50) architecture; “MLP multimodal” outperformed “CNN OCT” in predicting both all-eye (P < 0.05) and first-eye conversion (P < 0.001).

Conclusions

The 3-dimensional DL models, trained with OCT volumes, are capable of predicting both first-eye and fellow-eye imminent conversion to eAMD. The addition of clinical data further improved the model performance. These models, if validated prospectively, could serve as screening tools and allow retinal specialists to prioritize patients with more acute retinal issues.

Financial Disclosure(s)

Proprietary or commercial disclosure may be found in the Footnotes and Disclosures at the end of this article.
使用多模态数据和集成机器学习预测即将转变为渗出性年龄相关性黄斑变性
目的:渗出性年龄相关性黄斑变性(eAMD)是中央性视力丧失的主要原因。识别即将发生eAMD的高风险患者可以及时治疗并改善预后。我们的目标是开发和比较经典机器学习(ML)和深度学习(DL)模型,以预测6个月内即将发生的eAMD转换,并将OCT与临床数据整合到单个预测模型中。设计回顾性队列研究。参与者:2013年至2021年在Wilmer眼科研究所(Wilmer Eye Institute)发现的≥1只眼eAMD患者。方法收集转换前的光谱域OCT体积和相应的临床数据(年龄、最佳矫正视力、性别和同眼状态),用于模型训练或测试。对ResNet-50和经典ML (Random Forest和XGBoost)模型进行训练,以预测6个月内眼睛水平上即将发生的eAMD转化。多层感知器(multilayer perceptron, MLP)框架采用训练好的ResNet-50模型作为特征编码器,将下采样的特征向量与相应的临床表格数据拼接,通过MLP (prediction head)进行预测。数据按患者水平划分(75%训练,15%验证,10%测试)。使用操作特征曲线下面积(AUC)评估模型性能,并在对测试集进行10,000次自举后使用百分位数法计算模型的95%置信区间(AUC)。模型比较采用修正配对t检验。P & lt;0.05认为有统计学意义。主要结果测量工作特征曲线下的面积。结果2084例患者OCT检出33189份(女性63%;89.1%为白人,4.8%为黑人,2.3%为亚洲人。第一眼转换时的平均年龄为78.9(±9.3)岁。我们表现最好的模型,“MLP多模态”(用OCT和临床数据训练;AUC: 0.76, 95% CI: 0.71-0.80)和“CNN OCT”(仅用OCT数据训练;AUC: 0.75, 95% CI: 0.70-0.79),具有DL (ResNet-50)结构;“MLP多模态”在预测全眼(P <;0.05)和第一眼转归(P <;0.001)。结论用OCT体积训练的三维深度DL模型能够预测第一眼和同眼即将转变为eAMD。临床数据的加入进一步提高了模型的性能。这些模型,如果经过前瞻性验证,可以作为筛选工具,并允许视网膜专家优先考虑患有更严重视网膜问题的患者。财务披露专有或商业披露可在本文末尾的脚注和披露中找到。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Ophthalmology science
Ophthalmology science Ophthalmology
CiteScore
3.40
自引率
0.00%
发文量
0
审稿时长
89 days
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