Potential drug targets for peripheral artery disease identified through Mendelian randomization analysis.

IF 2.2 4区 医学 Q2 HEMATOLOGY
Xu Ding, Hui Li, Lihong Li, Yongjiu Yang, Zhong Chen
{"title":"Potential drug targets for peripheral artery disease identified through Mendelian randomization analysis.","authors":"Xu Ding, Hui Li, Lihong Li, Yongjiu Yang, Zhong Chen","doi":"10.1186/s12959-025-00738-4","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>Peripheral Artery Disease (PAD) is a common cardiovascular condition marked by peripheral artery stenosis or occlusion. Despite treatment advancements, patients will still face vascular complications, highlighting the need for innovative therapies. Human proteins play crucial roles in biology and drug research. Mendelian randomization (MR) analysis, a gene-based method, is increasingly used in drug target identification. This study aims to identify PAD-associated plasma proteins through MR analysis for potential therapies.</p><p><strong>Methods: </strong>We first used GWAS data and seven pQTL datasets to identify plasma proteins causally linked to PAD through MR analysis. Then, we performed KEGG pathway enrichment analysis, Bayesian colocalization analysis, and MR-BMA analysis were carried out to investigate mechanisms and prioritize these proteins. Finally, we assessed the druggability of the target proteins using the DrugBank database.</p><p><strong>Results: </strong>MR analysis found four plasma proteins causally linked to PAD: MMP3 positively correlated with PAD, while CASS4, ISG15, and MMP1 exhibited negative associations. Bayesian colocalization analysis confirmed these relationships, and the MR-BMA analysis prioritized MMP1 as the main target. KEGG pathway enrichment analysis highlighted lipid metabolism and atherosclerosis pathways as central to these drug targets. The druggability evaluation indicated that drugs targeting these proteins are either in development or already in clinical use.</p><p><strong>Conclusion: </strong>This study integrates genetic and proteomic data to identify therapeutic targets for PAD and evaluate their potential for drug development. The prioritization of MMP1 and ISG15 as key targets shows promise for PAD treatment, but further validation and clinical exploration of these findings are needed.</p>","PeriodicalId":22982,"journal":{"name":"Thrombosis Journal","volume":"23 1","pages":"52"},"PeriodicalIF":2.2000,"publicationDate":"2025-05-20","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12093625/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Thrombosis Journal","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1186/s12959-025-00738-4","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"HEMATOLOGY","Score":null,"Total":0}
引用次数: 0

Abstract

Introduction: Peripheral Artery Disease (PAD) is a common cardiovascular condition marked by peripheral artery stenosis or occlusion. Despite treatment advancements, patients will still face vascular complications, highlighting the need for innovative therapies. Human proteins play crucial roles in biology and drug research. Mendelian randomization (MR) analysis, a gene-based method, is increasingly used in drug target identification. This study aims to identify PAD-associated plasma proteins through MR analysis for potential therapies.

Methods: We first used GWAS data and seven pQTL datasets to identify plasma proteins causally linked to PAD through MR analysis. Then, we performed KEGG pathway enrichment analysis, Bayesian colocalization analysis, and MR-BMA analysis were carried out to investigate mechanisms and prioritize these proteins. Finally, we assessed the druggability of the target proteins using the DrugBank database.

Results: MR analysis found four plasma proteins causally linked to PAD: MMP3 positively correlated with PAD, while CASS4, ISG15, and MMP1 exhibited negative associations. Bayesian colocalization analysis confirmed these relationships, and the MR-BMA analysis prioritized MMP1 as the main target. KEGG pathway enrichment analysis highlighted lipid metabolism and atherosclerosis pathways as central to these drug targets. The druggability evaluation indicated that drugs targeting these proteins are either in development or already in clinical use.

Conclusion: This study integrates genetic and proteomic data to identify therapeutic targets for PAD and evaluate their potential for drug development. The prioritization of MMP1 and ISG15 as key targets shows promise for PAD treatment, but further validation and clinical exploration of these findings are needed.

通过孟德尔随机化分析确定外周动脉疾病的潜在药物靶点。
外周动脉疾病(PAD)是一种以外周动脉狭窄或闭塞为特征的常见心血管疾病。尽管治疗取得了进步,但患者仍将面临血管并发症,这凸显了对创新治疗方法的需求。人类蛋白质在生物学和药物研究中起着至关重要的作用。孟德尔随机化分析是一种基于基因的方法,在药物靶点鉴定中应用越来越广泛。本研究旨在通过MR分析鉴定pad相关的血浆蛋白,以寻找潜在的治疗方法。方法:我们首先使用GWAS数据和7个pQTL数据集,通过MR分析鉴定与PAD相关的血浆蛋白。然后,我们进行了KEGG通路富集分析、贝叶斯共定位分析和MR-BMA分析,以研究这些蛋白的机制并对其进行优先排序。最后,我们利用DrugBank数据库评估了目标蛋白的可药物性。结果:MR分析发现4种血浆蛋白与PAD有因果关系:MMP3与PAD呈正相关,而CASS4、ISG15和MMP1呈负相关。贝叶斯共定位分析证实了这些关系,MR-BMA分析优先考虑MMP1作为主要目标。KEGG通路富集分析强调脂质代谢和动脉粥样硬化通路是这些药物靶点的核心。可药性评价表明,以这些蛋白为靶点的药物正在开发或已进入临床应用。结论:该研究整合了遗传和蛋白质组学数据,以确定PAD的治疗靶点并评估其药物开发潜力。MMP1和ISG15作为关键靶点的优先级显示了PAD治疗的希望,但这些发现需要进一步的验证和临床探索。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Thrombosis Journal
Thrombosis Journal Medicine-Hematology
CiteScore
3.80
自引率
3.20%
发文量
69
审稿时长
16 weeks
期刊介绍: Thrombosis Journal is an open-access journal that publishes original articles on aspects of clinical and basic research, new methodology, case reports and reviews in the areas of thrombosis. Topics of particular interest include the diagnosis of arterial and venous thrombosis, new antithrombotic treatments, new developments in the understanding, diagnosis and treatments of atherosclerotic vessel disease, relations between haemostasis and vascular disease, hypertension, diabetes, immunology and obesity.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:604180095
Book学术官方微信