{"title":"What metabolomics has taught us about tomato fruit ripening and quality.","authors":"Esra Karakas, Alisdair R Fernie","doi":"10.1093/jxb/eraf209","DOIUrl":null,"url":null,"abstract":"<p><p>Tomato (Solanum lycopersicum) is a major crop and model species for investigating fruit metabolism, which plays a crucial role in determining flavor, nutritional quality and ripening. Metabolomics has profoundly expanded our comprehension of tomato fruit ripening and quality by unraveling the intricate biochemical dynamics underlying these processes. Leveraging high-throughput metabolite profiling, researchers have identified critical metabolic pathways governing ripening, encompassing phytohormones, primary metabolism and specialized metabolism. Integrated metabolomics, in combination with whole-genome sequencing, GWAS and QTL analysis provides a comprehensive approach to identifying key genetic and metabolomic determinants of agronomic traits. Here we provide highlights both established and emerging insights into the metabolic networks governing tomato ripening, emphasizing the potential of metabolomics-assisted breeding to enhance fruit taste and nutrition.</p>","PeriodicalId":15820,"journal":{"name":"Journal of Experimental Botany","volume":" ","pages":""},"PeriodicalIF":5.6000,"publicationDate":"2025-05-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Experimental Botany","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1093/jxb/eraf209","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
Tomato (Solanum lycopersicum) is a major crop and model species for investigating fruit metabolism, which plays a crucial role in determining flavor, nutritional quality and ripening. Metabolomics has profoundly expanded our comprehension of tomato fruit ripening and quality by unraveling the intricate biochemical dynamics underlying these processes. Leveraging high-throughput metabolite profiling, researchers have identified critical metabolic pathways governing ripening, encompassing phytohormones, primary metabolism and specialized metabolism. Integrated metabolomics, in combination with whole-genome sequencing, GWAS and QTL analysis provides a comprehensive approach to identifying key genetic and metabolomic determinants of agronomic traits. Here we provide highlights both established and emerging insights into the metabolic networks governing tomato ripening, emphasizing the potential of metabolomics-assisted breeding to enhance fruit taste and nutrition.
期刊介绍:
The Journal of Experimental Botany publishes high-quality primary research and review papers in the plant sciences. These papers cover a range of disciplines from molecular and cellular physiology and biochemistry through whole plant physiology to community physiology.
Full-length primary papers should contribute to our understanding of how plants develop and function, and should provide new insights into biological processes. The journal will not publish purely descriptive papers or papers that report a well-known process in a species in which the process has not been identified previously. Articles should be concise and generally limited to 10 printed pages.