Target of Rapamycin is involved in root hair development in Phaseolus vulgaris.

Plant signaling & behavior Pub Date : 2025-12-01 Epub Date: 2025-05-19 DOI:10.1080/15592324.2025.2507736
Hugo Alberto Monreal Contreras, Manoj-Kumar Arthikala, Miguel Lara, Kalpana Nanjareddy
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Abstract

Root hairs are essential for nutrient acquisition and rhizosphere interactions in vascular plants. While the Target of Rapamycin (TOR) kinase is a well established regulator of growth and metabolism, its role in root hair development in Phaseolus vulgaris remains underexplored. In this study, we investigated the role of TOR in root hair morphogenesis using RNA interference (RNAi)-mediated downregulation of PvTOR and transcriptomic profiling. Microscopic examination of PvTOR-RNAi roots confirmed significant reductions in root hair length and density. Transcriptomic analysis revealed differential expression of 148 P. vulgaris homologs of Arabidopsis thaliana root hair-related genes, with 63 genes downregulated and 85 upregulated. Gene Ontology enrichment analysis indicated that these differentially expressed genes (DEGs) were primarily involved in cellular development, cell differentiation, and redox regulation. Upregulation of phosphoinositide metabolism genes, ROS generators, and cell wall-related extensins suggests compensatory tip growth responses under TOR suppression. On the otherhand, repression of key auxin signaling genes and cell wall-loosening proteins such as EXPA1 and ENDOGLUCANASE5 indicates a shift away from elongation processes. Protein - protein interaction network analysis highlighted phosphoinositide and ROP GTPase signaling hubs as major pathways affected by TOR inhibition, suggesting that TOR indirectly modulates cell polarity and membrane dynamics essential for root hair development. These findings provide further evidence of TOR as a central integrator of hormonal, metabolic, and structural cues during root hair formation.

雷帕霉素靶点参与菜豆根毛发育。
根毛对维管植物的养分获取和根际相互作用至关重要。虽然雷帕霉素靶蛋白(TOR)激酶是一种成熟的生长和代谢调节剂,但其在菜豆根毛发育中的作用仍未得到充分研究。在这项研究中,我们通过RNA干扰(RNAi)介导的PvTOR下调和转录组学分析来研究TOR在根毛形态发生中的作用。显微检查PvTOR-RNAi根证实根毛长度和密度显著减少。转录组学分析显示,拟南芥根毛相关基因中148个同源基因存在差异表达,其中63个基因下调,85个基因上调。基因本体富集分析表明,这些差异表达基因(DEGs)主要参与细胞发育、细胞分化和氧化还原调控。磷酸化肌肽代谢基因、ROS产生基因和细胞壁相关延伸蛋白的上调表明,TOR抑制下的代偿尖端生长反应。另一方面,关键生长素信号基因和细胞壁松动蛋白(如EXPA1和ENDOGLUCANASE5)的抑制表明了从延伸过程的转变。蛋白-蛋白相互作用网络分析表明,磷酸肌苷和ROP GTPase信号中枢是受TOR抑制影响的主要途径,表明TOR间接调节根毛发育所必需的细胞极性和膜动力学。这些发现提供了进一步的证据,证明TOR在根毛形成过程中是激素、代谢和结构线索的中心整合者。
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