Integrating Transcriptomic and Proteomic Data: IL-27B as a Key Protein in the Development of Septic Cardiomyopathy—A Retrospective Study

IF 3.1 4区 医学 Q3 IMMUNOLOGY
Yifeng Mao, Qingqing Chen, Yongpo Jiang, Xijiang Zhang, Qin Si, Panpan Xu, Zhongheng Zhang, Cheng Zheng, Ronghai Lin
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引用次数: 0

Abstract

Background

Septic cardiomyopathy (SCM) is a potentially fatal complication of sepsis. In this study, transcriptomic and proteomic analyzes of serum samples from sepsis patients were conducted to uncover the underlying pathological mechanisms and identify potential therapeutic targets for SCM.

Methods

This retrospective, dual-center study investigated the progression of sepsis to SCM in patients admitted to intensive care units. A total of 50 patients were enrolled and divided into two groups: sepsis with cardiomyopathy (25 cases) and sepsis without cardiomyopathy (25 cases). Co-expression network analysis was employed to elucidate the biological significance of differentially expressed proteins. By integrating proteomic and transcriptomic data, molecular networks were constructed to visualize interactions among key molecules, aiming to enhance data interpretation and support the study's findings.

Results

Proteomic analysis identified 216 differentially expressed proteins (Fold change > 1.5, p-value < 0.05) between the two groups. Transcriptomic analysis revealed two proteins, including Interleukin-27 subunit beta (IL-27B) and carbonic anhydrase, co-downregulated in patients with septic cardiomyopathy. IL-27B was associated with the immune response, and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis indicated its involvement in the cytokine-cytokine receptor interaction signaling pathway.

Conclusion

Comprehensive integrated transcriptomic and proteomic analyzes identified significant changes in protein expression associated with SCM, primarily associated with inflammation-related pathways and amino acid metabolism. These findings provide new insights into the pathological mechanisms of SCM and highlight potential therapeutic targets for its treatment.

Trial Registration

The Clinical Research Ethics Committee of Taizhou Hospital of Zhejiang Province affiliated to Wenzhou Medical University approved this study, and written informed consent was given by all patients or their legal representatives. (NO.K20201110).

整合转录组学和蛋白质组学数据:IL-27B是脓毒性心肌病发展的关键蛋白-回顾性研究
脓毒性心肌病(SCM)是脓毒症的潜在致命并发症。本研究对脓毒症患者的血清样本进行转录组学和蛋白质组学分析,以揭示潜在的病理机制,并确定SCM的潜在治疗靶点。方法本回顾性双中心研究调查重症监护病房患者败血症发展为SCM的进展情况。共纳入50例患者,分为伴有心肌病的败血症(25例)和无心肌病的败血症(25例)两组。采用共表达网络分析阐明差异表达蛋白的生物学意义。通过整合蛋白质组学和转录组学数据,构建分子网络以可视化关键分子之间的相互作用,旨在增强数据解释并支持研究结果。结果蛋白质组学分析发现,两组间差异表达蛋白216个(Fold change > 1.5, p值<; 0.05)。转录组学分析显示两种蛋白,包括白细胞介素-27亚单位β (IL-27B)和碳酸酐酶,在脓毒性心肌病患者中共同下调。IL-27B与免疫应答相关,京都基因与基因组百科(KEGG)途径富集分析表明其参与细胞因子-细胞因子受体相互作用信号通路。结论综合转录组学和蛋白质组学分析发现,与SCM相关的蛋白质表达发生了显著变化,主要与炎症相关途径和氨基酸代谢有关。这些发现为SCM的病理机制提供了新的见解,并为其治疗提供了潜在的治疗靶点。本研究经温州医科大学附属浙江台州医院临床研究伦理委员会批准,并由所有患者或其法定代理人书面知情同意。(NO.K20201110)。
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来源期刊
Immunity, Inflammation and Disease
Immunity, Inflammation and Disease Medicine-Immunology and Allergy
CiteScore
3.60
自引率
0.00%
发文量
146
审稿时长
8 weeks
期刊介绍: Immunity, Inflammation and Disease is a peer-reviewed, open access, interdisciplinary journal providing rapid publication of research across the broad field of immunology. Immunity, Inflammation and Disease gives rapid consideration to papers in all areas of clinical and basic research. The journal is indexed in Medline and the Science Citation Index Expanded (part of Web of Science), among others. It welcomes original work that enhances the understanding of immunology in areas including: • cellular and molecular immunology • clinical immunology • allergy • immunochemistry • immunogenetics • immune signalling • immune development • imaging • mathematical modelling • autoimmunity • transplantation immunology • cancer immunology
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