Decoding the Genetic Puzzle of Inherited Retinal Dystrophies: Novel Insights From a Turkish Cohort.

IF 2.3 3区 医学 Q2 GENETICS & HEREDITY
Şenol Demir, Esra Arslan Ateş, Orkun Sevik, Bengisu Sözer, Tuğba Köse, Özlem Şahin, Ahmet Arman, Bilgen Bilge Geçkinli
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引用次数: 0

Abstract

Inherited retinal dystrophies (IRDs) are genetic disorders characterized by retinal pigment epithelium or photoreceptor degeneration. Advances in molecular diagnostic technologies, particularly next-generation sequencing (NGS), have facilitated the identification of disease-causing variants; however, population-specific genetic data, especially for Turkish cohorts, remain limited. This study aims to investigate the genetic profile of IRD patients in a Turkish cohort and assess the diagnostic utility of NGS-based gene panel testing. A total of 94 patients diagnosed with IRDs were included in the study. Genomic DNA was extracted from the peripheral blood of patients who met the inclusion and exclusion criteria. NGS was performed to analyze 141 genes associated with IRDs, following current clinical guidelines and utilizing up-to-date variant databases. Among the 94 patients, 97 variants were identified in 70 patients (74%). Of these, 58 variants (59.79%) were classified as pathogenic and 39 variants (40.21%) as likely pathogenic. Additionally, 28 variants (28%) were novel and have not been previously reported in the literature. Our findings demonstrate that NGS is a powerful tool for the molecular diagnosis of IRDs and emphasizes the genetic diversity of IRDs in the Turkish population. The identification of novel variants also highlights the need for continued variant curation and population-specific studies to enhance diagnostic accuracy and genetic counseling.

解码遗传性视网膜营养不良症的基因谜题:来自土耳其队列的新见解。
遗传性视网膜营养不良(IRDs)是一种以视网膜色素上皮或光感受器变性为特征的遗传性疾病。分子诊断技术的进步,特别是新一代测序技术的进步,促进了对致病变异的识别;然而,特定人群的遗传数据,特别是土耳其人群的遗传数据仍然有限。本研究旨在调查土耳其队列中IRD患者的遗传谱,并评估基于ngs的基因面板检测的诊断效用。共有94名诊断为IRDs的患者被纳入研究。从符合纳入和排除标准的患者外周血中提取基因组DNA。NGS分析了141个与ird相关的基因,遵循当前的临床指南并利用最新的变异数据库。在94例患者中,70例(74%)患者发现97种变异。其中58个变异(59.79%)被归类为致病性,39个变异(40.21%)被归类为可能致病性。此外,28个变异(28%)是新的,以前没有在文献中报道过。我们的研究结果表明,NGS是IRDs分子诊断的有力工具,并强调了土耳其人群中IRDs的遗传多样性。新变异的鉴定也强调了继续进行变异管理和人群特异性研究以提高诊断准确性和遗传咨询的必要性。
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来源期刊
Clinical Genetics
Clinical Genetics 医学-遗传学
CiteScore
6.50
自引率
0.00%
发文量
175
审稿时长
3-8 weeks
期刊介绍: Clinical Genetics links research to the clinic, translating advances in our understanding of the molecular basis of genetic disease for the practising clinical geneticist. The journal publishes high quality research papers, short reports, reviews and mini-reviews that connect medical genetics research with clinical practice. Topics of particular interest are: • Linking genetic variations to disease • Genome rearrangements and disease • Epigenetics and disease • The translation of genotype to phenotype • Genetics of complex disease • Management/intervention of genetic diseases • Novel therapies for genetic diseases • Developmental biology, as it relates to clinical genetics • Social science research on the psychological and behavioural aspects of living with or being at risk of genetic disease
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