Kuldeep Singh Negi,Subhajit Rana,Tanmoy Khan,Dipankar Mondal,Pratik Sen
{"title":"Interplay of Protein Fluctuation and Associated Water Dynamics in Osmolyte Induced Stabilization.","authors":"Kuldeep Singh Negi,Subhajit Rana,Tanmoy Khan,Dipankar Mondal,Pratik Sen","doi":"10.1016/j.bpj.2025.05.006","DOIUrl":null,"url":null,"abstract":"The mechanism behind osmolyte-induced protein stabilization remains elusive despite extensive research. Amongst various hypotheses, the associated water modulation hypothesis has proven to be the most effective in explaining osmolyte-induced stabilization effects. Earlier we had demonstrated that osmolytes that slow down associated water dynamics enhance protein thermal stability, whereas those that accelerate it, promote destabilization. However, the molecular basis of this correlation remains unclear. Using fluorescence correlation spectroscopy, we observe that osmolyte-induced changes in the associated water dynamics directly affect the internal flexibility of the protein, which is assessed through conformational fluctuation dynamics, serving as a tool to measure the protein's internal flexibility. The osmolytes that induce retardation in the associated water dynamics make the interior of the protein less flexible, as reflected by the slowed conformational fluctuation dynamics of the protein, leading to enhanced thermal stabilization. The destabilizers induce effects that are exactly opposite to stabilizers. These findings provide new insights into the interplay of associated water dynamics, protein flexibility, and stability, contributing to a deeper understanding of osmolyte induced protein stabilization.","PeriodicalId":8922,"journal":{"name":"Biophysical journal","volume":"71 1","pages":""},"PeriodicalIF":3.2000,"publicationDate":"2025-05-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Biophysical journal","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.bpj.2025.05.006","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOPHYSICS","Score":null,"Total":0}
引用次数: 0
Abstract
The mechanism behind osmolyte-induced protein stabilization remains elusive despite extensive research. Amongst various hypotheses, the associated water modulation hypothesis has proven to be the most effective in explaining osmolyte-induced stabilization effects. Earlier we had demonstrated that osmolytes that slow down associated water dynamics enhance protein thermal stability, whereas those that accelerate it, promote destabilization. However, the molecular basis of this correlation remains unclear. Using fluorescence correlation spectroscopy, we observe that osmolyte-induced changes in the associated water dynamics directly affect the internal flexibility of the protein, which is assessed through conformational fluctuation dynamics, serving as a tool to measure the protein's internal flexibility. The osmolytes that induce retardation in the associated water dynamics make the interior of the protein less flexible, as reflected by the slowed conformational fluctuation dynamics of the protein, leading to enhanced thermal stabilization. The destabilizers induce effects that are exactly opposite to stabilizers. These findings provide new insights into the interplay of associated water dynamics, protein flexibility, and stability, contributing to a deeper understanding of osmolyte induced protein stabilization.
期刊介绍:
BJ publishes original articles, letters, and perspectives on important problems in modern biophysics. The papers should be written so as to be of interest to a broad community of biophysicists. BJ welcomes experimental studies that employ quantitative physical approaches for the study of biological systems, including or spanning scales from molecule to whole organism. Experimental studies of a purely descriptive or phenomenological nature, with no theoretical or mechanistic underpinning, are not appropriate for publication in BJ. Theoretical studies should offer new insights into the understanding ofexperimental results or suggest new experimentally testable hypotheses. Articles reporting significant methodological or technological advances, which have potential to open new areas of biophysical investigation, are also suitable for publication in BJ. Papers describing improvements in accuracy or speed of existing methods or extra detail within methods described previously are not suitable for BJ.