{"title":"Global cross-database search system for X-ray absorption spectra.","authors":"Masashi Ishii, Asahiko Matsuda, Koichi Sakamoto, Shohei Yamashita, Yasuhiro Niwa, Yasuhiro Inada","doi":"10.1107/S1600577525002206","DOIUrl":null,"url":null,"abstract":"<p><p>While the importance of a systematic overview of scientific data and demands toward data integration are increasing, data capitalization and confidentiality are also emerging competitively. X-ray absorption spectroscopy has a strong tradition of data sharing, as cross-referencing data enhances the detailed understanding of the obtained spectra. While physically integrating databases in various formats is impractical, a system has been successfully developed that allows cross-searching among Japanese, USA and European databases in cyberspace. This achievement is made possible through the realization of `vocabulary unification' and `knowledge unification' on a global scale, implemented in publicly accessible endpoints. This paper provides a summary of the concepts of terminology, ontology and semantics for X-ray spectroscopy behind this system, and presents a pilot case study along with future directions for data integration in synchrotron radiation science.</p>","PeriodicalId":48729,"journal":{"name":"Journal of Synchrotron Radiation","volume":"32 Pt 3","pages":"661-668"},"PeriodicalIF":2.5000,"publicationDate":"2025-05-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12067341/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Synchrotron Radiation","FirstCategoryId":"101","ListUrlMain":"https://doi.org/10.1107/S1600577525002206","RegionNum":3,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2025/4/11 0:00:00","PubModel":"Epub","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0
Abstract
While the importance of a systematic overview of scientific data and demands toward data integration are increasing, data capitalization and confidentiality are also emerging competitively. X-ray absorption spectroscopy has a strong tradition of data sharing, as cross-referencing data enhances the detailed understanding of the obtained spectra. While physically integrating databases in various formats is impractical, a system has been successfully developed that allows cross-searching among Japanese, USA and European databases in cyberspace. This achievement is made possible through the realization of `vocabulary unification' and `knowledge unification' on a global scale, implemented in publicly accessible endpoints. This paper provides a summary of the concepts of terminology, ontology and semantics for X-ray spectroscopy behind this system, and presents a pilot case study along with future directions for data integration in synchrotron radiation science.
期刊介绍：
Synchrotron radiation research is rapidly expanding with many new sources of radiation being created globally. Synchrotron radiation plays a leading role in pure science and in emerging technologies. The Journal of Synchrotron Radiation provides comprehensive coverage of the entire field of synchrotron radiation and free-electron laser research including instrumentation, theory, computing and scientific applications in areas such as biology, nanoscience and materials science. Rapid publication ensures an up-to-date information resource for scientists and engineers in the field.
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