Using Data-Driven Methods to Improve Brain Blood Flow Measurements in Cerebrovascular Disease with Dynamic Imaging.

Siddhant Dogra, Xiuyuan Wang, James Michael Gee, Yihui Zhu, Koto Ishida, Seena Dehkharghani
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Abstract

Background and purpose: Cerebrovascular reactivity (CVR) is a widely studied biomarker of cerebral hemodynamics, commonly used in risk stratification and treatment planning in patients with steno-occlusive disease (SOD). Conventional use relies on normalization of estimates to contralateral hemisphere reference values, which is unsuitable for bilateral or indeterminate distributions of disease. We report upon a custom data-driven approach leveraging random forest classifiers (RFc) to identify candidate voxels for normalization in order to facilitate interrogation outside conditions of known unilateral SOD MATERIALS AND METHODS: We retrospectively analyzed 16 patients with unilateral SOD who underwent acetazolamide-augmented BOLD-MRI and DSC perfusion. Three RFc models were trained using leave-one-out cross-validation (LOOCV) to identify candidate voxels brain-wide whose CVR were within 10% of the normal hemispheric median: i. all voxels; ii. gray matter only; and iii. white matter only. Model input features included time-to-maximum (Tmax), mean transit time (MTT), cerebral blood flow (CBF), and cerebral blood volume (CBV) from contemporaneous DSC. The median model-predicted reference CVR (CVRref) was compared to ground-truth medians in LOOCV, and its impact on threshold-based volumetric classification of CVR reduction assessed.

Results: RFc models effectively predicted ground-truth CVR voxels, achieving median absolute percent differences of 12.8% (IQR: 5.0%-18.9%) using all voxels, 11.3% (IQR: 9.3%-16.1%) for gray matter, and 9.8% (IQR: 4.4%-16.9%) for white matter. Volumetric estimates of CVR reduction across thresholds for the models revealed excellent agreement between ground-truth and model estimates without statistically significant differences (p>0.01), excepting lowest white matter CVR thresholds. Model use in a small pilot deployment of bilateral SOD cases demonstrated the potential utility, enabling voxel-wise CVR assessment without reliance on contralateral reference.

Conclusions: We present a novel data-driven approach for normalizing CVR maps in patients with bilateral or indeterminate SOD. Using an RFc, our method provides an individualized, brain-wide reference CVR, expanding the utility of CVR estimates beyond the typical constraints of unilateral disease, and with potential application to other, similarly constrained scenarios such as for SPECT or PET hemodynamic studies.

Abbreviations: CVR = cerebrovascular reactivity; RFc = random forest classifier; SOD = steno-occlusive disease.

利用数据驱动方法改进脑血管疾病动态成像的脑血流测量。
背景与目的:脑血管反应性(CVR)是一种被广泛研究的脑血流动力学生物标志物,常用于狭窄闭塞性疾病(SOD)患者的风险分层和治疗计划。传统的使用依赖于对侧半球参考值的归一化估计,这不适用于双侧或不确定的疾病分布。我们报告了一种定制的数据驱动方法,利用随机森林分类器(RFc)来识别候选体素进行归一化,以便于询问已知单侧SOD的外部条件。材料和方法:我们回顾性分析了16例接受乙酰唑胺增强BOLD-MRI和DSC灌注的单侧SOD患者。使用留一交叉验证(LOOCV)对三个RFc模型进行训练,以识别CVR在正常半球中位数10%以内的候选脑范围体素:i.所有体素;2。只有灰质;ⅲ。只有白质。模型输入特征包括从同期DSC得到的最大时间(Tmax)、平均传输时间(MTT)、脑血流量(CBF)和脑血容量(CBV)。将中位数模型预测的参考CVR (CVRref)与LOOCV中的真值中位数进行比较,并评估其对基于阈值的CVR减小体积分类的影响。结果:RFc模型有效地预测了真实CVR体素,所有体素的绝对百分比中位数差异为12.8% (IQR: 5.0%-18.9%),灰质的绝对百分比中位数差异为11.3% (IQR: 9.3%-16.1%),白质的绝对百分比中位数差异为9.8% (IQR: 4.4%-16.9%)。除了最低的白质CVR阈值外,模型阈值上CVR减少的体积估计值显示,基础真实值与模型估计值之间非常吻合,没有统计学上的显著差异(p>0.01)。在双侧SOD病例的小规模试点部署中,该模型的使用证明了其潜在的实用性,可以在不依赖对侧参考的情况下进行体素CVR评估。结论:我们提出了一种新的数据驱动方法,用于双侧或不确定SOD患者的CVR图规范化。使用RFc,我们的方法提供了个体化的全脑参考CVR,扩展了CVR估计的实用性,超出了单侧疾病的典型限制,并具有潜在的应用于其他类似限制的情况,如SPECT或PET血液动力学研究。缩写:CVR =脑血管反应性;随机森林分类器;SOD =狭窄闭塞性疾病。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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