Bioactive Flavonoids and Phenolic Acids of Petroselinum Crispum as a Potential Inhibitor of α-amylase: An in silico Evaluation.

Ishita Biswas, Trishanjan Biswas, Debanjan Mitra
{"title":"Bioactive Flavonoids and Phenolic Acids of Petroselinum Crispum as a Potential Inhibitor of α-amylase: An in silico Evaluation.","authors":"Ishita Biswas, Trishanjan Biswas, Debanjan Mitra","doi":"10.2174/0115701638361734250414033830","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Type II diabetes mellitus is treated as one of the detrimental diseases and the drugs used for its treatment often lead to several side effects. Therefore, herbal medication of plant origin with lesser offshoot is a significant concern. Petroselinum crispum is a plant of pharma-ceutical interest. The present work aims to explore the potentiality assessment of flavonoids of Pe-troselinum crispum as an α-amylase inhibitor.</p><p><strong>Methods: </strong>Compounds were extracted from the database and evaluated through drug likeliness prop-erties, ADMET and toxicity assessment. Molecular docking was done to identify the best ligand, and the dynamics simulation study was performed with the leading ligand-protein complex.</p><p><strong>Results: </strong>Amongst the 15 bioactive compounds, apigenin appeared as the best ligand among all the studied compounds. Moreover, drug likeliness, physiochemical characteristics, and ADMET anal-yses revealed that apigenin does not deviate from Lipiniski's rule of five. Non-toxic apigenin showed a satisfactory docking score of -9.5 kcal/mol with human pancreatic α-amylase compared to the ref-erence molecule acarbose. Apigenin- α-amylase complex and apoprotein were subjected to 100ns molecular dynamics simulation to analyze the stability of the docked protein-ligand complex. The values of RMSD, RMSF, Rg, SASA and hydrogen bonding of the screened complexes showed high stability and less fluctuations of the apigenin- α-amylase complex.</p><p><strong>Conclusion: </strong>This finding suggests apigenin as alternative therapeutics in treating diabetes mellitus by targeting the enzyme α-amylase which can be used for in vitro cross-validation studies. This study is the first documentation of the antidiabetic potentiality of the flavonoid compounds of Petroselinum crispum through in silico investigation.</p>","PeriodicalId":93962,"journal":{"name":"Current drug discovery technologies","volume":" ","pages":""},"PeriodicalIF":0.0000,"publicationDate":"2025-05-02","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Current drug discovery technologies","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.2174/0115701638361734250414033830","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

Abstract

Background: Type II diabetes mellitus is treated as one of the detrimental diseases and the drugs used for its treatment often lead to several side effects. Therefore, herbal medication of plant origin with lesser offshoot is a significant concern. Petroselinum crispum is a plant of pharma-ceutical interest. The present work aims to explore the potentiality assessment of flavonoids of Pe-troselinum crispum as an α-amylase inhibitor.

Methods: Compounds were extracted from the database and evaluated through drug likeliness prop-erties, ADMET and toxicity assessment. Molecular docking was done to identify the best ligand, and the dynamics simulation study was performed with the leading ligand-protein complex.

Results: Amongst the 15 bioactive compounds, apigenin appeared as the best ligand among all the studied compounds. Moreover, drug likeliness, physiochemical characteristics, and ADMET anal-yses revealed that apigenin does not deviate from Lipiniski's rule of five. Non-toxic apigenin showed a satisfactory docking score of -9.5 kcal/mol with human pancreatic α-amylase compared to the ref-erence molecule acarbose. Apigenin- α-amylase complex and apoprotein were subjected to 100ns molecular dynamics simulation to analyze the stability of the docked protein-ligand complex. The values of RMSD, RMSF, Rg, SASA and hydrogen bonding of the screened complexes showed high stability and less fluctuations of the apigenin- α-amylase complex.

Conclusion: This finding suggests apigenin as alternative therapeutics in treating diabetes mellitus by targeting the enzyme α-amylase which can be used for in vitro cross-validation studies. This study is the first documentation of the antidiabetic potentiality of the flavonoid compounds of Petroselinum crispum through in silico investigation.

石竹黄酮和酚酸作为α-淀粉酶潜在抑制剂的实验研究。
背景:2型糖尿病被认为是一种有害的疾病,治疗2型糖尿病的药物往往会导致一些副作用。因此,具有较少分支的植物来源的草药是一个重要的问题。石竹是一种具有药用价值的植物。本研究旨在探讨甜菜黄酮作为α-淀粉酶抑制剂的潜力评价。方法:从数据库中提取化合物,通过药物似然性、ADMET和毒性评价对化合物进行评价。通过分子对接确定最佳配体,并对先导配体-蛋白复合物进行动力学模拟研究。结果:在15种活性化合物中,芹菜素是最佳配体。此外,药物可能性、理化特性和ADMET分析表明,芹菜素不偏离利皮尼斯基的五法则。与对照分子阿卡波糖相比,无毒芹菜素与人胰腺α-淀粉酶的对接评分为-9.5 kcal/mol,令人满意。对芹菜素- α-淀粉酶配合物和载脂蛋白进行100ns分子动力学模拟,分析对接蛋白-配体配合物的稳定性。所筛选的配合物的RMSD、RMSF、Rg、SASA和氢键值表明,芹菜素- α-淀粉酶配合物稳定性高,波动小。结论:芹菜素可作为靶向α-淀粉酶治疗糖尿病的替代药物,可用于体外交叉验证研究。本研究首次通过计算机实验证实了石竹中黄酮类化合物的抗糖尿病作用。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信