Diversity of telomeric sequences in true bugs (Heteroptera): new data on the infraorders Pentatomomorpha and Cimicomorpha.

IF 1.7 4区 生物学 Q4 CELL BIOLOGY
Valentina Kuznetsova, Natalia Golub, Boris Anokhin, Desislava Stoianova, Vladimir Lukhtanov
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引用次数: 0

Abstract

Introduction: Telomeric sequences are stable parts of the genome and are widely conserved among higher-level taxa (e.g., TTAGG in insects and other arthropods), although exceptions are known and their numbers are increasing with research. The true bug suborder Heteroptera (Hemiptera) includes more than 40,000 species in about 100 families, classified into seven infraorders. Four different telomeric motifs are currently known in Heteroptera, including (TTAGG)n, (TTAGGGATGG)n, (TTAGGGGTGG)n, and (TTAGGGTGGT)n. The canonical "insect" motif (TTAGG)n was found in representatives of two infraorders, Nepomorpha and Cimicomorpha. Derived motifs were found in a few species previously known as TTAGG-negative in the evolutionarily advanced sister infraorders Cimicomorpha and Pentatomomorpha (= Terheteroptera). Here, we studied telomeric motifs in 20 species of true bugs belonging to 10 families of Terheteroptera.

Methods: We used fluorescence in situ hybridization (FISH) with the "insect" telomeric probe (TTAGG)n and an alternative probe (TTAGGGATGG)n to map the distribution of telomeric sequences in the chromosomes of 8 species of Pentatomomorpha (from the families Pentatomidae, Rhopalidae, Lygaeidae, Geocoridae, and Blissidae). We also analyzed chromosome-level genome assemblies available in the NCBI database for another 4 species of Pentatomomorpha (from Alydidae, Coreidae, and Pentatomidae) and 8 species of Cimicomorpha (from Reduviidae, Miridae, and Anthocoridae).

Results: Overall, we identified telomeric sequences in all but one (Geocoris dispar; Geocoridae) species. The telomeric motif (TTAGGGATGG)n was detected in both Cimicomorpha (in the families Anthocoridae and Miridae) and Pentatomomorpha (in Blissidae, Lygaeidae, Pentatomidae, and Rhopalidae); the motif (TTAGGGGTGG)n was found only in Pentatomomorpha (in Alydidae, Coreidae, and Pentatomidae); and the canonical "insect" motif (TTAGG)n was found in the family Reduviidae (Cimicomorpha). With our new data, telomeric motifs are now known for 40 species of true bugs from 30 genera, 13 families and 3 infraorders, including Nepomorpha, Cimicomorpha, and Pentatomomorpha. Non-canonical motifs are found so far only in the Terheteroptera clade and are dominant in this group, with (TTAGGGATGG)n leading.

Conclusions: Our new data have expanded the understanding of telomere composition and evolution in Cimicomorpha and Pentatomomorpha and suggested that (TTAGGGATGG)n telomeric sequences can be considered ancestral for the entire clade Terheteroptera.

真蝽(异翅目)端粒序列的多样性:下目五形目和拟形目的新资料。
端粒序列是基因组的稳定部分,在高级分类群中广泛保守(例如,昆虫和其他节肢动物中的TTAGG),尽管已知的例外情况和它们的数量随着研究而增加。真正的昆虫亚目异翅目(半翅目)包括约100科4万余种,分为7个亚目。目前已知在异翅目中有四种不同的端粒基序,包括(TTAGG)n、(TTAGGGATGG)n、(TTAGGGGTGG)n和(TTAGGGTGGT)n。典型的“昆虫”基序(TTAGG)n在新形目和西形目两个次目的代表中被发现。在进化先进的姐妹次目Cimicomorpha和Pentatomomorpha (= Terheteroptera)中发现了一些衍生基序,这些基序先前被认为是ttagg阴性。本文对10科20种真蝽的端粒结构进行了研究。方法:采用“昆虫”端粒探针(TTAGG)n和替代探针(TTAGGGATGG)n的荧光原位杂交(FISH)技术,绘制了8种Pentatomomorpha (Pentatomidae, Rhopalidae, Lygaeidae, Geocoridae, Blissidae)的染色体端粒序列分布。我们还分析了NCBI数据库中另外4种Pentatomomorpha(来自Alydidae, Coreidae和Pentatomidae)和8种Cimicomorpha(来自Reduviidae, Miridae和Anthocoridae)的染色体水平基因组组装。结果:总体而言,我们确定了除一种外的所有端粒序列(Geocoris dispar;Geocoridae)物种。端粒基序(TTAGGGATGG)n在拟花科和拟花科的拟花科和拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科的拟花科中均检测到;基序(TTAGGGGTGG)n仅存在于五角蝽科(蛱蝶科、蛱蝶科和蛱蝶科);而典型的“昆虫”基序(TTAGG)n则出现在慈足科(Reduviidae)中。根据我们的新数据,现在已知了30属13科3次目40种真虫的端粒基序,包括Nepomorpha, Cimicomorpha和Pentatomomorpha。到目前为止,非规范基序仅在异翅目分支中发现,并在该分支中占主导地位,以(TTAGGGATGG)n为主导。结论:我们的新数据扩大了对齐胚亚和五胚亚端粒组成和进化的认识,并提示(TTAGGGATGG)n端粒序列可以被认为是整个异翅目的祖先。
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来源期刊
Cytogenetic and Genome Research
Cytogenetic and Genome Research 生物-细胞生物学
CiteScore
3.10
自引率
5.90%
发文量
25
审稿时长
1 months
期刊介绍: During the last decades, ''Cytogenetic and Genome Research'' has been the leading forum for original reports and reviews in human and animal cytogenetics, including molecular, clinical and comparative cytogenetics. In recent years, most of its papers have centered on genome research, including gene cloning and sequencing, gene mapping, gene regulation and expression, cancer genetics, comparative genetics, gene linkage and related areas. The journal also publishes key papers on chromosome aberrations in somatic, meiotic and malignant cells. Its scope has expanded to include studies on invertebrate and plant cytogenetics and genomics. Also featured are the vast majority of the reports of the International Workshops on Human Chromosome Mapping, the reports of international human and animal chromosome nomenclature committees, and proceedings of the American and European cytogenetic conferences and other events. In addition to regular issues, the journal has been publishing since 2002 a series of topical issues on a broad variety of themes from cytogenetic and genome research.
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