Identification of novel candidate genes for regulating oil composition in soybean seeds under environmental stresses.

IF 4.1 2区 生物学 Q1 PLANT SCIENCES
Frontiers in Plant Science Pub Date : 2025-04-17 eCollection Date: 2025-01-01 DOI:10.3389/fpls.2025.1572319
Patrick Bewick, Peter Forstner, Bo Zhang, Eva Collakova
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引用次数: 0

Abstract

Introduction: A key objective of soybean breeding programs is to enhance nutritional quality for human and animal consumption, with improved fatty acid (FA) composition for health benefits, and expand soybean use for industrial applications.

Methods: We conducted a metabolite genome-wide association study (mGWAS) to identify genomic regions associated with changes in FA composition and FA ratios in soybean seeds influenced by environmental factors. This mGWAS utilized 218 soybean plant introductions (PIs) grown in two field locations in Virginia over two years.

Results: The mGWAS revealed that 20 SNPs were significantly associated with 21 FA ratios, while additional suggestive SNPs were found for 36 FA ratios, highlighting potential quantitative trait loci linked to FA composition.

Discussion: Many of these SNPs are located near or within the genes related to phytohormone-mediated biotic and abiotic stress responses, suggesting the involvement of environmental factors in modulating FA composition in soybean seeds. Our findings provide novel insights into the genetic and environmental factors influencing FA composition in oilseeds. This research also lays the foundation for developing stable markers to develop soybean cultivars with tailored FA profiles for different practical applications under variable growth conditions.

环境胁迫下调节大豆种子油脂成分的新候选基因的鉴定。
大豆育种计划的一个关键目标是提高人类和动物消费的营养品质,改善脂肪酸(FA)组成以促进健康,并扩大大豆的工业应用。方法:我们进行了一项代谢物全基因组关联研究(mGWAS),以确定受环境因素影响的大豆种子中与FA组成和FA比率变化相关的基因组区域。该mGWAS在两年多的时间里利用了218株大豆引种植物(pi)在弗吉尼亚州的两个大田种植。结果:mGWAS显示,20个snp与21个FA比例显著相关,而另外36个FA比例发现了提示性snp,突出了与FA组成相关的潜在数量性状位点。讨论:许多这些snp位于与植物激素介导的生物和非生物胁迫反应相关的基因附近或内部,表明环境因素参与了大豆种子中FA组成的调节。我们的发现对影响油籽中FA组成的遗传和环境因素提供了新的见解。该研究也为开发稳定的标记奠定了基础,从而开发出适合不同生长条件下不同实际应用的大豆品种。
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来源期刊
Frontiers in Plant Science
Frontiers in Plant Science PLANT SCIENCES-
CiteScore
7.30
自引率
14.30%
发文量
4844
审稿时长
14 weeks
期刊介绍: In an ever changing world, plant science is of the utmost importance for securing the future well-being of humankind. Plants provide oxygen, food, feed, fibers, and building materials. In addition, they are a diverse source of industrial and pharmaceutical chemicals. Plants are centrally important to the health of ecosystems, and their understanding is critical for learning how to manage and maintain a sustainable biosphere. Plant science is extremely interdisciplinary, reaching from agricultural science to paleobotany, and molecular physiology to ecology. It uses the latest developments in computer science, optics, molecular biology and genomics to address challenges in model systems, agricultural crops, and ecosystems. Plant science research inquires into the form, function, development, diversity, reproduction, evolution and uses of both higher and lower plants and their interactions with other organisms throughout the biosphere. Frontiers in Plant Science welcomes outstanding contributions in any field of plant science from basic to applied research, from organismal to molecular studies, from single plant analysis to studies of populations and whole ecosystems, and from molecular to biophysical to computational approaches. Frontiers in Plant Science publishes articles on the most outstanding discoveries across a wide research spectrum of Plant Science. The mission of Frontiers in Plant Science is to bring all relevant Plant Science areas together on a single platform.
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