Mathematical Correlation of Yield Coefficients Based on Individual Reaction of Cell and Product Formation and Total Metabolic Reaction in Biological Reaction Kinetic Modeling.

IF 3.2 4区 生物学 Q2 BIOCHEMISTRY & MOLECULAR BIOLOGY
Swatika Juhana, Fitri Nur Kayati, Aris Sudomo, Arini Wresta
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引用次数: 0

Abstract

Kinetic models are important tools required in designing biological reactors and can be developed through mass balance equations arrangement based on kinetic data of microorganism metabolic reactions. Yield coefficients are an important parameter in the arrangement of mass balance equations as they can quantitatively link substrate consumption to cell and product formation. We know two forms of yield coefficients of cell and product formation that have different uses. The first coefficients are derived from the stoichiometric equation of overall metabolic reaction and the second are derived from the parallel reactions of cell formation, product formation, and maintenance. Since these types of yield coefficients are usually written in the similar pattern, these coefficients are frequently misused. A previous researcher has defined and differentiated the use of these two types of yield coefficients to avoid inappropriate uses that can cause an error in the calculation results. To complete and clarify the definition, this communication discusses the mathematical correlation between these two types of yield coefficients using the latest thermodynamic approach for stoichiometric coefficients estimation of metabolic reaction.

生物反应动力学模型中基于细胞个体反应与产物生成及总代谢反应的产率系数的数学关联。
动力学模型是设计生物反应器所需的重要工具,可以根据微生物代谢反应的动力学数据整理质量平衡方程。产率系数是排列质量平衡方程中的一个重要参数,因为它可以定量地将底物消耗与细胞和产物形成联系起来。我们知道有两种不同用途的细胞和产物形成产率系数形式。第一个系数由总代谢反应的化学计量方程导出,第二个系数由细胞形成、产物形成和维持的平行反应导出。由于这些类型的屈服系数通常以相似的模式书写,因此这些系数经常被误用。之前有研究人员定义并区分了这两种屈服系数的使用,以避免使用不当导致计算结果错误。为了完善和澄清这一定义,本文使用最新的热力学方法来估计代谢反应的化学计量系数,讨论了这两种产率系数之间的数学相关性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Biotechnology and applied biochemistry
Biotechnology and applied biochemistry 工程技术-生化与分子生物学
CiteScore
6.00
自引率
7.10%
发文量
117
审稿时长
3 months
期刊介绍: Published since 1979, Biotechnology and Applied Biochemistry is dedicated to the rapid publication of high quality, significant research at the interface between life sciences and their technological exploitation. The Editors will consider papers for publication based on their novelty and impact as well as their contribution to the advancement of medical biotechnology and industrial biotechnology, covering cutting-edge research in synthetic biology, systems biology, metabolic engineering, bioengineering, biomaterials, biosensing, and nano-biotechnology.
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