Xi Chen, Jianbo Ba, Yuanhua Liu, Jiaqi Huang, Ke Li, Yun Yin, Jin Shi, Jiayao Xu, Rui Yuan, Michael P Ward, Wei Tu, Lili Yu, Quanyi Wang, Xiaoli Wang, Zhaorui Chang, Zhijie Zhang
{"title":"Spatiotemporal filtering modeling of hand, foot, and mouth disease: a case study from East China, 2009-2015.","authors":"Xi Chen, Jianbo Ba, Yuanhua Liu, Jiaqi Huang, Ke Li, Yun Yin, Jin Shi, Jiayao Xu, Rui Yuan, Michael P Ward, Wei Tu, Lili Yu, Quanyi Wang, Xiaoli Wang, Zhaorui Chang, Zhijie Zhang","doi":"10.1017/S0950268824001080","DOIUrl":null,"url":null,"abstract":"<p><p>Hand, foot, and mouth disease (HFMD) shows spatiotemporal heterogeneity in China. A spatiotemporal filtering model was constructed and applied to HFMD data to explore the underlying spatiotemporal structure of the disease and determine the impact of different spatiotemporal weight matrices on the results. HFMD cases and covariate data in East China were collected between 2009 and 2015. The different spatiotemporal weight matrices formed by Rook, K-nearest neighbour (KNN; <i>K</i> = 1), distance, and second-order spatial weight matrices (<i>SO-SWM</i>) with first-order temporal weight matrices in contemporaneous and lagged forms were decomposed, and spatiotemporal filtering model was constructed by selecting eigenvectors according to <i>MC</i> and the <i>AIC.</i> We used <i>MI</i>, standard deviation of the regression coefficients, and five indices (<i>AIC</i>, <i>BIC</i>, <i>DIC</i>, <i>R</i><sup>2</sup>, and <i>MSE</i>) to compare the spatiotemporal filtering model with a Bayesian spatiotemporal model. The eigenvectors effectively removed spatial correlation in the model residuals (Moran's <i>I</i> < 0.2, <i>p</i> > 0.05). The Bayesian spatiotemporal model's Rook weight matrix outperformed others. The spatiotemporal filtering model with <i>SO-SWM</i> was superior, as shown by lower <i>AIC</i> (92,029.60), <i>BIC</i> (92,681.20), and <i>MSE</i> (418,022.7) values, and higher <i>R</i><sup>2</sup> (0.56) value. All spatiotemporal contemporaneous structures outperformed the lagged structures. Additionally, eigenvector maps from the Rook and <i>SO-SWM</i> closely resembled incidence patterns of HFMD.</p>","PeriodicalId":11721,"journal":{"name":"Epidemiology and Infection","volume":"153 ","pages":"e61"},"PeriodicalIF":2.5000,"publicationDate":"2025-04-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC12041904/pdf/","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Epidemiology and Infection","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1017/S0950268824001080","RegionNum":4,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
引用次数: 0
Abstract
Hand, foot, and mouth disease (HFMD) shows spatiotemporal heterogeneity in China. A spatiotemporal filtering model was constructed and applied to HFMD data to explore the underlying spatiotemporal structure of the disease and determine the impact of different spatiotemporal weight matrices on the results. HFMD cases and covariate data in East China were collected between 2009 and 2015. The different spatiotemporal weight matrices formed by Rook, K-nearest neighbour (KNN; K = 1), distance, and second-order spatial weight matrices (SO-SWM) with first-order temporal weight matrices in contemporaneous and lagged forms were decomposed, and spatiotemporal filtering model was constructed by selecting eigenvectors according to MC and the AIC. We used MI, standard deviation of the regression coefficients, and five indices (AIC, BIC, DIC, R2, and MSE) to compare the spatiotemporal filtering model with a Bayesian spatiotemporal model. The eigenvectors effectively removed spatial correlation in the model residuals (Moran's I < 0.2, p > 0.05). The Bayesian spatiotemporal model's Rook weight matrix outperformed others. The spatiotemporal filtering model with SO-SWM was superior, as shown by lower AIC (92,029.60), BIC (92,681.20), and MSE (418,022.7) values, and higher R2 (0.56) value. All spatiotemporal contemporaneous structures outperformed the lagged structures. Additionally, eigenvector maps from the Rook and SO-SWM closely resembled incidence patterns of HFMD.
手足口病(手足口病)在中国呈现时空异质性。构建时空滤波模型并应用于手足口病数据,探索手足口病的潜在时空结构,确定不同时空权重矩阵对结果的影响。收集2009 - 2015年华东地区手足口病病例及协变量数据。由Rook、k -近邻(KNN;将K = 1)、距离、二阶空间权重矩阵(SO-SWM)与一阶时间权重矩阵进行同步和滞后形式的分解,并根据MC和AIC选择特征向量,构建时空滤波模型。利用MI、回归系数标准差、AIC、BIC、DIC、R2和MSE等5个指标,将时空滤波模型与贝叶斯时空模型进行比较。特征向量有效地去除了模型残差中的空间相关性(Moran’s I p > 0.05)。贝叶斯时空模型的白头鸦权矩阵优于其他模型。基于SO-SWM的时空滤波模型具有较低的AIC(92,029.60)、BIC(92,681.20)和MSE(418,022.7)和较高的R2(0.56)的优势。所有时空同步结构都优于滞后结构。此外,来自Rook和SO-SWM的特征向量图与手足口病的发病模式非常相似。
期刊介绍:
Epidemiology & Infection publishes original reports and reviews on all aspects of infection in humans and animals. Particular emphasis is given to the epidemiology, prevention and control of infectious diseases. The scope covers the zoonoses, outbreaks, food hygiene, vaccine studies, statistics and the clinical, social and public-health aspects of infectious disease, as well as some tropical infections. It has become the key international periodical in which to find the latest reports on recently discovered infections and new technology. For those concerned with policy and planning for the control of infections, the papers on mathematical modelling of epidemics caused by historical, current and emergent infections are of particular value.