Computational investigation of m-acetamide and 3MPAEA: Characterization, toxicity, and molecular docking and dynamic analyses.

IF 2.1 4区 医学 Q3 CHEMISTRY, MULTIDISCIPLINARY
Nevin Çankaya, Mehmet Hanifi Kebiroğlu, Serap Yalcin Azarkan
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引用次数: 0

Abstract

In this study, 2-(3-methoxyphenylamino)-2-oxoethyl acrylate (3MPAEA) molecule was synthesized in two steps. In the first step, 2-chloro-N-(3-methoxyphenyl)acetamide (m-acetamide) was obtained. Density functional theory (DFT) calculations were performed to obtain information about the electronic and structural properties of the synthesized molecules. The Raman Spectrum and UV-Visible analysis were calculated using the Gaussian package program. Additionally, Natural Bond Orbital (NBO) Analysis, Electron Localization Function (ELF), Electrostatic Potential Map (ESP), Average Local Ionization Energy (ALIE), and the toxicological properties of the molecules were examined. Simultaneously, molecular docking and dynamic analyses were conducted to investigate the interaction of m-acetamide and 3MPAEA with proteins involved in nuclear receptor signaling pathways, stress response pathways, molecular initiating events, and metabolism, as identified in the protox analysis. The findings aligned with the protox analysis results. The results obtained provide new insights into the electronic and toxicological properties of these molecules.

间乙酰胺和3MPAEA的计算研究:表征、毒性、分子对接和动力学分析。
本研究分两步合成了2-(3-甲氧基苯胺)-2-氧乙基丙烯酸酯(3MPAEA)分子。第一步制得2-氯- n -(3-甲氧基苯基)乙酰胺。密度泛函理论(DFT)计算得到了有关合成分子的电子和结构性质的信息。利用高斯包程序计算拉曼光谱和紫外可见光谱。此外,还对分子的自然键轨道(NBO)分析、电子定位函数(ELF)、静电势图(ESP)、平均局部电离能(ALIE)和毒理学特性进行了检测。同时,进行分子对接和动力学分析,研究m-乙酰胺和3MPAEA与protox分析中发现的核受体信号通路、应激反应通路、分子启动事件和代谢等相关蛋白的相互作用。这些发现与病毒分析结果一致。所获得的结果为这些分子的电子和毒理学特性提供了新的见解。
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来源期刊
Drug and Chemical Toxicology
Drug and Chemical Toxicology 医学-毒理学
CiteScore
6.00
自引率
3.80%
发文量
99
审稿时长
3 months
期刊介绍: Drug and Chemical Toxicology publishes full-length research papers, review articles and short communications that encompass a broad spectrum of toxicological data surrounding risk assessment and harmful exposure. Manuscripts are considered according to their relevance to the journal. Topics include both descriptive and mechanics research that illustrates the risk assessment implications of exposure to toxic agents. Examples of suitable topics include toxicological studies, which are structural examinations on the effects of dose, metabolism, and statistical or mechanism-based approaches to risk assessment. New findings and methods, along with safety evaluations, are also acceptable. Special issues may be reserved to publish symposium summaries, reviews in toxicology, and overviews of the practical interpretation and application of toxicological data.
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