Data accessibility in the chemical sciences: an analysis of recent practice in organic chemistry journals.

IF 2.2 4区 化学 Q2 CHEMISTRY, ORGANIC
Beilstein Journal of Organic Chemistry Pub Date : 2025-05-02 eCollection Date: 2025-01-01 DOI:10.3762/bjoc.21.70
Sally Bloodworth, Cerys Willoughby, Simon J Coles
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引用次数: 0

Abstract

The discoverability and reusability of data is critical for machine learning to drive new discovery in the chemical sciences, and the 'FAIR Guiding Principles for scientific data management and stewardship' provide a measurable set of guidelines that can be used to ensure the accessibility of reusable data. We investigate the data practice of researchers publishing in specialist organic chemistry journals, by analyzing the outputs of 240 randomly selected research papers from 12 top-ranked journals published in early 2023. We investigate compliance with recommended (but not compulsory) data policies, assess the accessibility and reusability of data, and if the existence of specific recommendations for publishing NMR data by some journals supports author compliance. We find that, although authors meet mandated requirements, there is very limited compliance with data sharing policies that are only recommended by journals. Overall, there is little evidence to suggest that authors' publishing practice meets FAIR data guidance. We suggest first steps that researchers can take to move towards a positive culture of data sharing in organic chemistry. Routine actions that we encourage as standard practice include deposition of raw and metadata to open repositories, and inclusion of machine-readable structure identifiers for all reported compounds.

化学科学中的数据可及性:有机化学期刊近期实践分析。
数据的可发现性和可重用性对于机器学习推动化学科学的新发现至关重要,“科学数据管理和管理的公平指导原则”提供了一套可衡量的指导方针,可用于确保可重用数据的可访问性。我们通过分析随机抽取的12种顶级期刊在2023年初发表的240篇研究论文的产出,调查了在专业有机化学期刊上发表的研究人员的数据实践。我们调查了推荐的(但不是强制性的)数据策略的遵从性,评估了数据的可访问性和可重用性,以及是否存在某些期刊发布NMR数据的特定建议支持作者遵从性。我们发现,尽管作者满足了规定的要求,但对仅由期刊推荐的数据共享政策的遵守非常有限。总体而言,几乎没有证据表明作者的出版实践符合FAIR数据指南。我们建议研究人员可以采取的第一步是朝着有机化学数据共享的积极文化发展。我们鼓励作为标准实践的常规操作包括将原始数据和元数据存储到开放的存储库中,以及为所有报告的化合物包含机器可读的结构标识符。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
CiteScore
4.90
自引率
3.70%
发文量
167
审稿时长
1.4 months
期刊介绍: The Beilstein Journal of Organic Chemistry is an international, peer-reviewed, Open Access journal. It provides a unique platform for rapid publication without any charges (free for author and reader) – Platinum Open Access. The content is freely accessible 365 days a year to any user worldwide. Articles are available online immediately upon publication and are publicly archived in all major repositories. In addition, it provides a platform for publishing thematic issues (theme-based collections of articles) on topical issues in organic chemistry. The journal publishes high quality research and reviews in all areas of organic chemistry, including organic synthesis, organic reactions, natural product chemistry, structural investigations, supramolecular chemistry and chemical biology.
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