Computational Drug Repurposing Screening Targeting Profibrotic Cytokine in Acute Respiratory Distress Syndrome.

IF 1.8 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Yong Mao, Wei Xu, Li Chen, Handi Liao
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引用次数: 0

Abstract

Acute Respiratory Distress Syndrome (ARDS) is a severe lung disease with a high fatality rate and few treatment options. Targeting certain signalling pathways, notably the Transforming Growth Factor-beta (TGF-beta) signalling pathway, has emerged as a promising option for ARDS therapy. We identified TGF-beta Receptor 1 (TGFBR1) as a major target for ARDS treatment using the STRING and KEGG databases and validated TGFBR1's critical function in the TGF-beta signalling pathway, which is important in ARDS pathogenesis. To find prospective TGFBR1 inhibitors, we selected two FDA-approved medicines, Galunisertib and Vactosertib, which are established pharmacological profiles in cancer and fibrotic illnesses. Furthermore, the SwissSimilarity platform's ligand-based virtual screening revealed structurally related drugs in the DrugBank and ChEMBL databases. Among these, seven candidates were selected for further consideration. Molecular docking experiments found that DB08387 and CHEMBL14297639 had the strongest affinity for TGFBR1, creating strong hydrogen bonds at key sites. These findings point to their potential as TGFBR1 inhibitors in ARDS treatment. The pharmacokinetic screening revealed that most of the chosen compounds had favourable ADME features, with CHEMBL14297639 standing out for its low gastrointestinal absorption and limited cytochrome P450 inhibition. This study demonstrates the possibility of targeting TGFBR1 with Galunisertib, Vactosertib, and other prospective ARDS treatments. The findings lay the groundwork for additional experimental validation and the development of innovative therapeutics aimed at reducing ARDS severity.

急性呼吸窘迫综合征中靶向纤维化细胞因子的计算药物再利用筛选。
急性呼吸窘迫综合征(ARDS)是一种严重的肺部疾病,死亡率高,治疗方案少。靶向某些信号通路,特别是转化生长因子- β (tgf - β)信号通路,已成为ARDS治疗的一个有希望的选择。我们利用STRING和KEGG数据库确定了tgf - β受体1 (TGFBR1)作为ARDS治疗的主要靶点,并验证了TGFBR1在tgf - β信号通路中的关键功能,这在ARDS发病机制中很重要。为了寻找有前景的TGFBR1抑制剂,我们选择了两种fda批准的药物Galunisertib和Vactosertib,这两种药物已在癌症和纤维化疾病中建立了药理学特征。此外,SwissSimilarity平台基于配体的虚拟筛选在DrugBank和ChEMBL数据库中发现了结构相关的药物。在这些候选人中,有7名候选人被选作进一步审议。分子对接实验发现,DB08387和CHEMBL14297639对TGFBR1的亲和力最强,在关键位点形成强氢键。这些发现指出了它们作为TGFBR1抑制剂在ARDS治疗中的潜力。药代动力学筛选显示,大多数选择的化合物具有良好的ADME特征,其中CHEMBL14297639因其低胃肠道吸收和有限的细胞色素P450抑制而脱颖而出。这项研究证明Galunisertib、Vactosertib和其他有前景的ARDS治疗靶向TGFBR1的可能性。这一发现为进一步的实验验证和开发旨在降低ARDS严重程度的创新疗法奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Cell Biochemistry and Biophysics
Cell Biochemistry and Biophysics 生物-生化与分子生物学
CiteScore
4.40
自引率
0.00%
发文量
72
审稿时长
7.5 months
期刊介绍: Cell Biochemistry and Biophysics (CBB) aims to publish papers on the nature of the biochemical and biophysical mechanisms underlying the structure, control and function of cellular systems The reports should be within the framework of modern biochemistry and chemistry, biophysics and cell physiology, physics and engineering, molecular and structural biology. The relationship between molecular structure and function under investigation is emphasized. Examples of subject areas that CBB publishes are: · biochemical and biophysical aspects of cell structure and function; · interactions of cells and their molecular/macromolecular constituents; · innovative developments in genetic and biomolecular engineering; · computer-based analysis of tissues, cells, cell networks, organelles, and molecular/macromolecular assemblies; · photometric, spectroscopic, microscopic, mechanical, and electrical methodologies/techniques in analytical cytology, cytometry and innovative instrument design For articles that focus on computational aspects, authors should be clear about which docking and molecular dynamics algorithms or software packages are being used as well as details on the system parameterization, simulations conditions etc. In addition, docking calculations (virtual screening, QSAR, etc.) should be validated either by experimental studies or one or more reliable theoretical cross-validation methods.
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