The use of a convolutional neural network to automate radiologic scoring of computed tomography of paranasal sinuses.

IF 2.9 4区 医学 Q3 ENGINEERING, BIOMEDICAL
Daniel J Lee, Mohammad Hamghalam, Lily Wang, Hui-Ming Lin, Errol Colak, Muhammad Mamdani, Amber L Simpson, John M Lee
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引用次数: 0

Abstract

Background: Chronic rhinosinusitis (CRS) is diagnosed with symptoms and objective endoscopy or computed tomography (CT). The Lund-Mackay score (LMS) is often used to determine the radiologic severity of CRS and make clinical decisions. This proof-of-concept study aimed to develop an automated algorithm combining a convolutional neural network (CNN) for sinus segmentation with post-processing to compute LMS directly from CT scans.

Results: Radiology Information System was queried for outpatient paranasal sinus CTs at a tertiary institution. We identified 1,399 CT scans which were manually labelled with LMS of individual sinuses. Seventy-seven CT scans with 13,668 coronal images were segmented manually for individual sinuses. Our model for segmentation achieved a mean Dice score of 0.85 for all sinus regions, except for the osteomeatal complex. For individual Dice scores were 0.95, 0.71, 0.78, 0.93, 0.86 for the maxillary, anterior ethmoid, posterior ethmoid, sphenoid, and frontal sinuses, respectively. LMS was computed automatically by applying adaptive image thresholding and pixel counting to the CNN's segmented regions. A convolutional neural network (CNN) model was trained to segment each sinus region. Overall, the LMS model showed a high degree of accuracy with a score of 0.92, 0.99, 0.99, 0.97, 0.99, 0.86 for the maxillary, anterior ethmoid, posterior ethmoid, sphenoid, and frontal sinuses, respectively.

Conclusions: Reporting of paranasal sinus CT can be automated and potentially standardized with a CNN model to provide accurate Lund-Mackay score.

使用卷积神经网络自动鼻窦计算机断层扫描的放射学评分。
背景:慢性鼻窦炎(CRS)的诊断有症状和客观的内窥镜或计算机断层扫描(CT)。lnd - mackay评分(LMS)常用于确定CRS的放射学严重程度并做出临床决策。这项概念验证研究旨在开发一种自动算法,结合卷积神经网络(CNN)进行鼻窦分割和后处理,直接从CT扫描中计算LMS。结果:对某高等院校门诊鼻窦ct资料进行查询。我们确定了1399个CT扫描,这些扫描被人工标记为单个鼻窦的LMS。对77张CT扫描13668张冠状面图像进行单个鼻窦人工分割。我们的分割模型在除骨鼻道复合体外的所有鼻窦区域的平均Dice评分为0.85。上颌窦、前筛窦、后筛窦、蝶窦和额窦的个体Dice评分分别为0.95、0.71、0.78、0.93、0.86。LMS通过对CNN分割的区域应用自适应图像阈值和像素计数自动计算。训练卷积神经网络(CNN)模型对每个窦区进行分割。总体而言,LMS模型对上颌窦、前筛窦、后筛窦、蝶窦和额窦的评分分别为0.92、0.99、0.99、0.99、0.97、0.99、0.86,准确度较高。结论:使用CNN模型可以自动报告鼻窦CT,并可能标准化,以提供准确的隆德-麦基评分。
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来源期刊
BioMedical Engineering OnLine
BioMedical Engineering OnLine 工程技术-工程:生物医学
CiteScore
6.70
自引率
2.60%
发文量
79
审稿时长
1 months
期刊介绍: BioMedical Engineering OnLine is an open access, peer-reviewed journal that is dedicated to publishing research in all areas of biomedical engineering. BioMedical Engineering OnLine is aimed at readers and authors throughout the world, with an interest in using tools of the physical and data sciences and techniques in engineering to understand and solve problems in the biological and medical sciences. Topical areas include, but are not limited to: Bioinformatics- Bioinstrumentation- Biomechanics- Biomedical Devices & Instrumentation- Biomedical Signal Processing- Healthcare Information Systems- Human Dynamics- Neural Engineering- Rehabilitation Engineering- Biomaterials- Biomedical Imaging & Image Processing- BioMEMS and On-Chip Devices- Bio-Micro/Nano Technologies- Biomolecular Engineering- Biosensors- Cardiovascular Systems Engineering- Cellular Engineering- Clinical Engineering- Computational Biology- Drug Delivery Technologies- Modeling Methodologies- Nanomaterials and Nanotechnology in Biomedicine- Respiratory Systems Engineering- Robotics in Medicine- Systems and Synthetic Biology- Systems Biology- Telemedicine/Smartphone Applications in Medicine- Therapeutic Systems, Devices and Technologies- Tissue Engineering
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