Effect of temperature and time on RNA detection by RT-qPCR in rodent tissue and blood samples stored in MagMAX™ Lysis/Binding Solution Concentrate: Considerations for RNA detection in specimens stored under suboptimal conditions

IF 1.6 4区 医学 Q3 BIOCHEMICAL RESEARCH METHODS
Katherine A. Davies , Stephen R. Welch , Teresa E. Sorvillo , JoAnn D. Coleman-McCray , Christina F. Spiropoulou , Jessica R. Spengler
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引用次数: 0

Abstract

For detection of viral RNA in blood or tissue, samples are often collected into lysis buffers prior to downstream molecular analysis. Immediate sample processing and cold storage are not always possible during large-scale or field studies, or in facilities lacking a stable electrical supply. Additionally, samples may need to be transported significant distances before processing. Here, using peptidylprolyl isomerase A (Ppia), a stably expressed gene in rodent tissues, we investigate the long-term stability and detection of RNA in guinea pig tissues stored for up to 52 weeks and in hamster blood stored for up to 12 weeks in MagMAX Lysis/Binding Solution Concentrate at −80°C, 4°C, 21°C, and 32°C.
温度和时间对保存在MagMAX™裂解/结合浓缩液中的啮齿动物组织和血液样品中RNA RT-qPCR检测的影响:在次优条件下保存的标本中RNA检测的考虑
为了检测血液或组织中的病毒RNA,通常在下游分子分析之前将样品收集到裂解缓冲液中。在大规模或实地研究期间,或在缺乏稳定电力供应的设施中,并不总是可能立即进行样品处理和冷藏。此外,样品在处理前可能需要运输很远的距离。在这里,我们使用在啮齿动物组织中稳定表达的基因肽基脯氨酸异构酶A (Ppia),研究了储存长达52周的豚鼠组织和储存长达12周的仓鼠血液在MagMAX裂解/结合浓缩液中在- 80°C, 4°C, 21°C和32°C下的长期稳定性和RNA的检测。
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来源期刊
CiteScore
5.80
自引率
0.00%
发文量
209
审稿时长
41 days
期刊介绍: The Journal of Virological Methods focuses on original, high quality research papers that describe novel and comprehensively tested methods which enhance human, animal, plant, bacterial or environmental virology and prions research and discovery. The methods may include, but not limited to, the study of: Viral components and morphology- Virus isolation, propagation and development of viral vectors- Viral pathogenesis, oncogenesis, vaccines and antivirals- Virus replication, host-pathogen interactions and responses- Virus transmission, prevention, control and treatment- Viral metagenomics and virome- Virus ecology, adaption and evolution- Applied virology such as nanotechnology- Viral diagnosis with novelty and comprehensive evaluation. We seek articles, systematic reviews, meta-analyses and laboratory protocols that include comprehensive technical details with statistical confirmations that provide validations against current best practice, international standards or quality assurance programs and which advance knowledge in virology leading to improved medical, veterinary or agricultural practices and management.
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