Structural optimization of atomic clusters using iterated dynamic lattice search: With application to silver clusters

IF 7.2 2区 物理与天体物理 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Xiangjing Lai , Jin-Kao Hao , Zhaolu Guo , Quan Wen , Zhang-Hua Fu
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引用次数: 0

Abstract

Predicting the global minimum structures of atomic clusters has important practical implications in physics and chemistry. This is because the global minimum structures of their potential function theoretically correspond to their ground state structures, which determine some important physical and chemical properties of clusters. However, this prediction task is a very challenging global optimization problem due to the fact that the number of local minima on the potential energy surface of clusters increases exponentially with the cluster size. In this study, we propose an unbiased global optimization approach, called the iterated dynamic lattice search algorithm, to search for the global minimum structure of atomic clusters. Based on the iterated local search framework, the proposed algorithm employs the well-known monotonic basin-hopping method to improve the initial structures of clusters, a surface-based perturbation operator to randomly change the positions of selected surface atoms or central atom, a dynamic lattice search method to optimize the positions of surface atoms, and the Metropolis acceptance rule to accept the optimized new solutions. The performance of the algorithm is evaluated on the 300 widely studied silver clusters and experimental results show that the proposed algorithm is highly efficient compared to the existing algorithms. In particular, the proposed algorithm improves the best-known structures for 47 clusters and matches the best-known structures for the remaining clusters. Additional experiments are performed to analyze the key components of the algorithm and the landscape of the potential energy surface of several representative clusters.
使用迭代动态晶格搜索的原子团簇结构优化:在银团簇中的应用
预测原子团簇的全局最小结构在物理和化学中具有重要的实际意义。这是因为它们的势函数的全局最小结构在理论上与它们的基态结构相对应,而基态结构决定了簇的一些重要的物理和化学性质。然而,该预测任务是一个非常具有挑战性的全局优化问题,因为簇的势能面上的局部极小值的数量随着簇的大小呈指数增长。在这项研究中,我们提出了一种无偏全局优化方法,称为迭代动态点阵搜索算法,用于搜索原子簇的全局最小结构。该算法基于迭代局部搜索框架,采用单调跳池法改进簇的初始结构,采用基于表面的扰动算子随机改变所选表面原子或中心原子的位置,采用动态点阵搜索法优化表面原子的位置,采用Metropolis接受规则接受优化后的新解。在300个被广泛研究的银簇上对该算法的性能进行了评估,实验结果表明,与现有算法相比,该算法具有更高的效率。特别地,提出的算法改进了47个聚类的最知名结构,并匹配了其余聚类的最知名结构。通过实验分析了该算法的关键组成部分和几个具有代表性的聚类的势能面格局。
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来源期刊
Computer Physics Communications
Computer Physics Communications 物理-计算机:跨学科应用
CiteScore
12.10
自引率
3.20%
发文量
287
审稿时长
5.3 months
期刊介绍: The focus of CPC is on contemporary computational methods and techniques and their implementation, the effectiveness of which will normally be evidenced by the author(s) within the context of a substantive problem in physics. Within this setting CPC publishes two types of paper. Computer Programs in Physics (CPiP) These papers describe significant computer programs to be archived in the CPC Program Library which is held in the Mendeley Data repository. The submitted software must be covered by an approved open source licence. Papers and associated computer programs that address a problem of contemporary interest in physics that cannot be solved by current software are particularly encouraged. Computational Physics Papers (CP) These are research papers in, but are not limited to, the following themes across computational physics and related disciplines. mathematical and numerical methods and algorithms; computational models including those associated with the design, control and analysis of experiments; and algebraic computation. Each will normally include software implementation and performance details. The software implementation should, ideally, be available via GitHub, Zenodo or an institutional repository.In addition, research papers on the impact of advanced computer architecture and special purpose computers on computing in the physical sciences and software topics related to, and of importance in, the physical sciences may be considered.
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