The space writhes and signatures of polymer knots

IF 1.6 4区 物理与天体物理 Q3 PHYSICS, CONDENSED MATTER
Finn Thompson, Maria Maalouf, Alexander R. Klotz
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引用次数: 0

Abstract

The space writhe of a knot is a property of its three-dimensional embedding that contains information about its underlying topology, but the correspondence between space writhe and other topological invariants is not fully understood. We perform Langevin dynamics simulations of knotted semi-flexible polymers and measure their ensemble average space writhe. We show that for all knots up to 10 crossings, alternating and non-alternating, the average space writhe is almost equal to that of the tightest known configuration of the same knot, with minor differences. Using this equivalence, we show that for more complex knots with up to 38 crossings, the average space writhe is strongly correlated with the signature of the knot. This establishes that the connection between signature and space writhe holds at larger crossing numbers.

空间扭曲和聚合物结的特征
结的空间扭曲是其三维嵌入的一种性质,它包含了其底层拓扑的信息,但空间扭曲与其他拓扑不变量之间的对应关系尚未完全理解。我们对结型半柔性聚合物进行了朗之万动力学模拟,并测量了它们的系综平均空间扭曲。我们表明,对于所有结,交替和非交替,超过10个交叉,平均空间扭扭几乎等于已知最紧的配置相同的结,有微小的差异。利用这个等价,我们证明了对于有多达38个交叉点的更复杂的结,平均空间扭动与结的特征密切相关。这表明,在较大的交叉数下,签名和空间扭曲之间的联系是成立的。
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来源期刊
The European Physical Journal B
The European Physical Journal B 物理-物理:凝聚态物理
CiteScore
2.80
自引率
6.20%
发文量
184
审稿时长
5.1 months
期刊介绍: Solid State and Materials; Mesoscopic and Nanoscale Systems; Computational Methods; Statistical and Nonlinear Physics
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