Navigating Solid-Form Screening Using In Silico Methods Validated with Experimental Data for a Drug-like Molecule

IF 3.2 2区 化学 Q2 CHEMISTRY, MULTIDISCIPLINARY
Anantha Rajmohan Muthusamy*, Diwakar Chauhan*, Arvind Kumar Jain, Meenakshi Sundaram Somasundaram and Amit Singh, 
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Abstract

We investigated the polymorphism of Ziritaxestat (ZTS) by combining sophisticated computational prediction models with experimental crystallization techniques. In order to forecast a stable amorphous state, we developed an improved neural network model. We performed conformational energy calculations using a potential energy scan (PES) and COSMO-RS-predicted activity coefficients to identify a low-energy conformer that could be experimentally obtained in a stable anhydrous form. The predictions of solubility trends in various solvents using COSMO-RS were consistent with the experimental solubility. Using the COSMO-RS function, the solvate probability was predicted. Additionally, the COSMOtherm contact probability calculations predicted the solvation site, while the COSMO BP-TZVPD-FINE level theory determined the hydrogen bonding energy for the solvates and hydrates. We further obtained the hydrate and solvate systems through experimentation. We validated these in silico methods, further approving the proof of concept. With our diverse methodology, we were able to create a nonsolvated crystal form, four different hydrate polymorphs, and various solvates. All novel forms of ZTS (Form A, Form B, Form C, Form D, Form E, Form F, and amorphous) were thoroughly characterized by PXRD, DSC, TGA, NMR, and DVS techniques, among others. The close agreement between calculated conformations and experimental data was proven by single-crystal structure analysis. In this work, we validated the computationally designed algorithms with experimental results to efficiently search for anhydrous, solvates, hydrates, solvate-hydrate, and amorphous forms. This integrated synergistic computational–experimental approach resulted in maximum polymorph search and minimized the polymorphic risk.

Abstract Image

使用经过实验数据验证的药物样分子的计算机方法导航固体形式筛选
采用复杂的计算预测模型与实验结晶技术相结合的方法研究了锆他司他(ZTS)的多态性。为了预测稳定的非晶态,我们开发了一种改进的神经网络模型。我们使用势能扫描(PES)和cosmos - rs预测活度系数进行构象能计算,以确定可以在实验中以稳定的无水形式获得的低能构象。COSMO-RS在各种溶剂中的溶解度趋势预测与实验溶解度一致。利用cosmos - rs函数,预测了溶剂化概率。此外,COSMOtherm接触概率计算预测了溶剂化位点,COSMO BP-TZVPD-FINE能级理论确定了溶剂化物和水合物的氢键能。通过实验进一步得到了水合物体系和溶剂体系。我们在计算机上验证了这些方法,进一步批准了概念验证。通过我们多样化的方法,我们能够创建一种非溶剂化晶体形式,四种不同的水合物多晶型和各种溶剂化物。所有新形式的ZTS(形式A,形式B,形式C,形式D,形式E,形式F和无定形)都通过PXRD, DSC, TGA, NMR和DVS技术等进行了全面表征。单晶结构分析证明了计算构象与实验数据的一致性。在这项工作中,我们用实验结果验证了计算设计的算法,以有效地搜索无水、溶剂化物、水合物、溶剂-水合物和非晶态。这种综合的协同计算-实验方法实现了最大的多态性搜索和最小的多态性风险。
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来源期刊
Crystal Growth & Design
Crystal Growth & Design 化学-材料科学:综合
CiteScore
6.30
自引率
10.50%
发文量
650
审稿时长
1.9 months
期刊介绍: The aim of Crystal Growth & Design is to stimulate crossfertilization of knowledge among scientists and engineers working in the fields of crystal growth, crystal engineering, and the industrial application of crystalline materials. Crystal Growth & Design publishes theoretical and experimental studies of the physical, chemical, and biological phenomena and processes related to the design, growth, and application of crystalline materials. Synergistic approaches originating from different disciplines and technologies and integrating the fields of crystal growth, crystal engineering, intermolecular interactions, and industrial application are encouraged.
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