Robust and resource-optimal dynamic pattern formation of Min proteins in vivo

IF 17.6 1区 物理与天体物理 Q1 PHYSICS, MULTIDISCIPLINARY
Ziyuan Ren, Henrik Weyer, Michael Sandler, Laeschkir Würthner, Haochen Fu, Chanin B. Tangtartharakul, Dongyang Li, Cindy Sou, Daniel Villarreal, Judy E. Kim, Erwin Frey, Suckjoon Jun
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引用次数: 0

Abstract

The Min protein system prevents abnormal cell division in bacteria by forming oscillatory patterns between cell poles. However, predicting the protein concentrations at which oscillations start and whether cells can maintain them under physiological perturbations remains challenging. Here we show that dynamic pattern formation is robust across a wide range of Min protein levels and variations in the growth physiology using genetically engineered Escherichia coli strains. We modulate the expression of minCD and minE under fast- and slow-growth conditions and build a MinD versus MinE phase diagram that reveals dynamic patterns, including travelling and standing waves. We found that the natural expression level of Min proteins is resource-optimal and robust to changes in protein concentration. In addition, we observed an invariant wavelength of dynamic Min patterns across the phase diagram. We explain the experimental findings quantitatively with biophysical theory based on reaction–diffusion models that consider the switching of MinE between its latent and active states, indicating its essential role as a robustness module for Min oscillation in vivo. Our results underline the potential of integrating quantitative cell physiology and biophysical modelling to understand the fundamental mechanisms controlling cell division machinery, and they offer insights applicable to other biological processes.

Abstract Image

强健和资源最优的动态模式形成的Min蛋白在体内
Min蛋白系统通过在细胞两极之间形成振荡模式来防止细菌的异常细胞分裂。然而,预测振荡开始时的蛋白质浓度以及细胞是否能在生理扰动下维持它们仍然具有挑战性。在这里,我们展示了动态模式的形成在广泛的Min蛋白水平和使用基因工程大肠杆菌菌株的生长生理学变化中是稳健的。我们在快速和慢速生长条件下调节minCD和minE的表达,并建立了一个MinD与minE相图,揭示了动态模式,包括行波和驻波。我们发现Min蛋白的自然表达水平是资源最优的,并且对蛋白浓度的变化具有鲁棒性。此外,我们在相图中观察到一个不变的波长的动态最小模式。我们用基于反应扩散模型的生物物理理论定量地解释了实验结果,该模型考虑了MinE在潜伏状态和活跃状态之间的切换,表明它作为体内最小振荡的鲁棒性模块的重要作用。我们的研究结果强调了整合定量细胞生理学和生物物理建模的潜力,以了解控制细胞分裂机制的基本机制,并为其他生物过程提供了适用的见解。
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来源期刊
Nature Physics
Nature Physics 物理-物理:综合
CiteScore
30.40
自引率
2.00%
发文量
349
审稿时长
4-8 weeks
期刊介绍: Nature Physics is dedicated to publishing top-tier original research in physics with a fair and rigorous review process. It provides high visibility and access to a broad readership, maintaining high standards in copy editing and production, ensuring rapid publication, and maintaining independence from academic societies and other vested interests. The journal presents two main research paper formats: Letters and Articles. Alongside primary research, Nature Physics serves as a central source for valuable information within the physics community through Review Articles, News & Views, Research Highlights covering crucial developments across the physics literature, Commentaries, Book Reviews, and Correspondence.
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