Steroid hormone binding and modulation of Trichinella spiralis progesterone receptor: A computational approach

IF 2.3 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Muhammad Tahir Aleem , Shakeel Ahmed Lakho , Muhammad Mohsin , Shahbaz Ul haq , Ashiq Ali , Danmei Huang , Fenfei Gao
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引用次数: 0

Abstract

Trichinellosis, caused by Trichinella species, including Trichinella spiralis, is a foodborne zoonotic disease. Upon ingestion, ML swiftly invade the intra-multicellular niche of the small intestine, undergoing four rapid molts to mature into adults. In general, the route of transmission for T. spiralis nematodes occurs through ingestion of pork. Therefore, it is crucial to develop a vaccine that can deal with trichinellosis, particularly for humans and pigs. In this study, homology modelling, molecular docking, simulations and molecular mechanics-based scoring (MM/GBSA) are used to investigate the interaction between T. spiralis membrane-associated progesterone receptor component 2 (Ts-MAPRC2) and different steroids hormones. In the most favorable region, 93 amino acid residues (92.1 %) are located, while 7 amino acids (6.9 %) are located in the allowed region, showing that the model with a 93.33 ERRAT quality factor is good quality. The MD simulations were conducted for 50 ns to explore the affinities and stability of four hormones chosen from the docking studies that showed similar binding poses to the control hormone Mifepristone. Simulations showed that the selected hormones were potent Ts-MAPRC2 binders and can act as leads to determine their activity by biophysical assays. Discovery of these five steroid hormones and interactions with Ts-MAPRC2 could lead to new therapies and vaccines for trichinellosis.
旋毛虫孕酮受体的类固醇激素结合和调节:计算方法
旋毛虫病是一种食源性人畜共患疾病,由包括旋毛虫在内的旋毛虫引起。摄食后,ML迅速侵入小肠内的多细胞生态位,经历四次快速蜕皮,成熟为成虫。一般来说,螺旋体线虫的传播途径是通过食用猪肉。因此,开发一种能够对付旋毛虫病的疫苗至关重要,特别是针对人类和猪。本研究采用同源性建模、分子对接、模拟和基于分子力学的评分(MM/GBSA)等方法研究了螺旋体膜相关孕酮受体组分2 (Ts-MAPRC2)与不同类固醇激素的相互作用。在最有利区域有93个氨基酸残基(92.1%),在允许区域有7个氨基酸残基(6.9%),表明模型质量较好,ERRAT质量因子为93.33。MD模拟进行了50 ns,以探索从对接研究中选择的四种激素的亲和力和稳定性,这些激素与对照激素米非司酮具有相似的结合姿态。模拟结果表明,所选择的激素是有效的Ts-MAPRC2结合物,可以作为生物物理测定其活性的先导物。发现这五种类固醇激素及其与Ts-MAPRC2的相互作用可能会导致旋毛虫病的新疗法和新疫苗。
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来源期刊
Biochemistry and Biophysics Reports
Biochemistry and Biophysics Reports Biochemistry, Genetics and Molecular Biology-Biophysics
CiteScore
4.60
自引率
0.00%
发文量
191
审稿时长
59 days
期刊介绍: Open access, online only, peer-reviewed international journal in the Life Sciences, established in 2014 Biochemistry and Biophysics Reports (BB Reports) publishes original research in all aspects of Biochemistry, Biophysics and related areas like Molecular and Cell Biology. BB Reports welcomes solid though more preliminary, descriptive and small scale results if they have the potential to stimulate and/or contribute to future research, leading to new insights or hypothesis. Primary criteria for acceptance is that the work is original, scientifically and technically sound and provides valuable knowledge to life sciences research. We strongly believe all results deserve to be published and documented for the advancement of science. BB Reports specifically appreciates receiving reports on: Negative results, Replication studies, Reanalysis of previous datasets.
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