Generalized additive modeling as a tool for the analysis of the time course of tail coiling behavior in zebrafish (Danio rerio) embryos – A proof-of-concept study with nicotine, a known developmental neurotoxicant

IF 4.1 2区 环境科学与生态学 Q1 MARINE & FRESHWATER BIOLOGY
Maria Fischer , Raoul Wolf , Robin Hannemann , Thomas Braunbeck
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Abstract

The early detectable tail coiling behavior of zebrafish (Danio rerio) embryos is receiving increasing attention in the context of (developmental) neurotoxicity testing and may be used as a rapid screening tool for compounds with unknown or suspected neurotoxic potential. The observation of this behavior over a longer period of time already offered advantages such as the possibility of detecting effects that only occur after a few hours of development. The two major parameters, duration and frequency of coiling, allow a detailed characterization of the movements. However, this approach usually leads to complex data sets, which are often heavily simplified to allow for simpler analysis of the effects on an hourly basis. In this study, the suitability of generalized additive modeling (GAM) for the analysis of coiling behavior was tested in order to obtain an integrated impression of the trends in movement patterns. To this end, nicotine, a known potent developmental neurotoxicant, was used in a proof-of-concept study. The main advantage of GAM for biological data lies in the relaxation of assumptions, such as effect monotony, data distribution and homogeneity of variances and is, therefore, more flexible in describing different trends over time. The possibility to consider replicates and individuals as additional sources of (biological) variance is a further benefit, as highly variable data are common in behavioral studies. Here, the modeling approach demonstrates a monotone reduction of movement duration as a direct consequence of nicotine exposure. Additional pathomorphological studies revealed structural damage in secondary motoneurons and skeletal muscles as potential underlying mechanisms of changes in movement patterns. The GAM proved well-suited to illustrate and analyze complex non-linear behavioral data with high natural variability. The model also allows to reliably extract no observed effect (NOEC) and lowest observed effect concentrations (LOEC) from complex data sets, which may be of relevance in a regulatory context.
广义加法建模作为分析斑马鱼(Danio rerio)胚胎尾卷行为时间过程的工具-尼古丁(一种已知的发育神经毒物)的概念验证研究
斑马鱼(Danio rerio)胚胎早期可检测的尾卷行为在(发育)神经毒性测试的背景下受到越来越多的关注,并可能被用作具有未知或疑似神经毒性潜力的化合物的快速筛选工具。在较长时间内观察这种行为已经提供了一些优势,例如可以检测到仅在几个小时后发生的影响。两个主要参数,持续时间和卷绕频率,允许详细表征运动。然而,这种方法通常会导致复杂的数据集,这些数据集通常被大大简化,以便更简单地分析每小时的影响。在这项研究中,为了获得运动模式趋势的综合印象,测试了广义加性建模(GAM)对卷曲行为分析的适用性。为此,尼古丁,一种已知的强效发育神经毒物,被用于概念验证研究。生物数据GAM的主要优势在于放宽了假设,例如效应单调性、数据分布和方差的同质性,因此在描述不同时间的不同趋势时更加灵活。考虑复制和个体作为(生物)变异的额外来源的可能性是另一个好处,因为高度可变的数据在行为研究中很常见。在这里,建模方法表明运动持续时间的单调减少是尼古丁暴露的直接后果。另外的病理形态学研究显示,次级运动神经元和骨骼肌的结构损伤是运动模式改变的潜在潜在机制。GAM被证明非常适合于说明和分析具有高自然变异性的复杂非线性行为数据。该模型还允许从复杂数据集中可靠地提取无观察效应(NOEC)和最低观察效应浓度(LOEC),这可能与监管背景相关。
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来源期刊
Aquatic Toxicology
Aquatic Toxicology 环境科学-毒理学
CiteScore
7.10
自引率
4.40%
发文量
250
审稿时长
56 days
期刊介绍: Aquatic Toxicology publishes significant contributions that increase the understanding of the impact of harmful substances (including natural and synthetic chemicals) on aquatic organisms and ecosystems. Aquatic Toxicology considers both laboratory and field studies with a focus on marine/ freshwater environments. We strive to attract high quality original scientific papers, critical reviews and expert opinion papers in the following areas: Effects of harmful substances on molecular, cellular, sub-organismal, organismal, population, community, and ecosystem level; Toxic Mechanisms; Genetic disturbances, transgenerational effects, behavioral and adaptive responses; Impacts of harmful substances on structure, function of and services provided by aquatic ecosystems; Mixture toxicity assessment; Statistical approaches to predict exposure to and hazards of contaminants The journal also considers manuscripts in other areas, such as the development of innovative concepts, approaches, and methodologies, which promote the wider application of toxicological datasets to the protection of aquatic environments and inform ecological risk assessments and decision making by relevant authorities.
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