Observation of odd–even effect in 1-alcohols through pentapeptide-coated quartz crystal microbalance sensors with molecular docking study

IF 3.5 2区 物理与天体物理 Q2 PHYSICS, APPLIED
Thuc Anh Ngo, Kosuke Minami, Tanju Yildirim, Kota Shiba, Genki Yoshikawa
{"title":"Observation of odd–even effect in 1-alcohols through pentapeptide-coated quartz crystal microbalance sensors with molecular docking study","authors":"Thuc Anh Ngo, Kosuke Minami, Tanju Yildirim, Kota Shiba, Genki Yoshikawa","doi":"10.1063/5.0254577","DOIUrl":null,"url":null,"abstract":"The discrimination between odd and even carbon chain molecules is crucial in detecting odd chain metabolites resulting from impaired biosynthetic processes. However, the discrimination of these metabolomes via gas sensors presents significant challenges due to the lack of connection between material–gas interaction and odd–even carbon chain molecules. In this study, a homologous series of 1-alcohols is systematically investigated, quantitatively comparing the measured signals obtained using pentapeptide-coated gas sensors and pentapeptide–gas interactions calculated via molecular docking simulations. The pentapeptide-coated gas sensor exhibits a clear odd–even effect in both absorption and desorption processes, demonstrating better discrimination between odd- and even-numbered carbon compounds. The results indicate that the odd–even effect during the absorption process is closely associated with the hydrophobic interaction between a pentapeptide and a gas molecule, while the interactions affecting the desorption phase may vary depending on the pentapeptide properties. The insights into the molecular interactions involved in the odd–even effect will facilitate the development of materials for detecting odd chain metabolites, which can enhance the accuracy of gas-sensing technologies toward health monitoring applications.","PeriodicalId":8094,"journal":{"name":"Applied Physics Letters","volume":"2 1","pages":""},"PeriodicalIF":3.5000,"publicationDate":"2025-04-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Applied Physics Letters","FirstCategoryId":"101","ListUrlMain":"https://doi.org/10.1063/5.0254577","RegionNum":2,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PHYSICS, APPLIED","Score":null,"Total":0}
引用次数: 0

Abstract

The discrimination between odd and even carbon chain molecules is crucial in detecting odd chain metabolites resulting from impaired biosynthetic processes. However, the discrimination of these metabolomes via gas sensors presents significant challenges due to the lack of connection between material–gas interaction and odd–even carbon chain molecules. In this study, a homologous series of 1-alcohols is systematically investigated, quantitatively comparing the measured signals obtained using pentapeptide-coated gas sensors and pentapeptide–gas interactions calculated via molecular docking simulations. The pentapeptide-coated gas sensor exhibits a clear odd–even effect in both absorption and desorption processes, demonstrating better discrimination between odd- and even-numbered carbon compounds. The results indicate that the odd–even effect during the absorption process is closely associated with the hydrophobic interaction between a pentapeptide and a gas molecule, while the interactions affecting the desorption phase may vary depending on the pentapeptide properties. The insights into the molecular interactions involved in the odd–even effect will facilitate the development of materials for detecting odd chain metabolites, which can enhance the accuracy of gas-sensing technologies toward health monitoring applications.
利用五肽包覆石英晶体微平衡传感器观察1-醇的奇偶效应
奇数和偶数碳链分子的区分对于检测由生物合成过程受损引起的奇数链代谢物至关重要。然而,由于材料-气体相互作用和奇偶碳链分子之间缺乏联系,通过气体传感器对这些代谢组的识别面临着重大挑战。在本研究中,系统地研究了同源系列的1-醇,定量地比较了使用五肽包被气体传感器获得的测量信号和通过分子对接模拟计算的五肽-气体相互作用。五肽包被气体传感器在吸附和解吸过程中均表现出明显的奇偶效应,对奇数碳化合物和偶数碳化合物具有较好的区分能力。结果表明,吸附过程中的奇偶效应与五肽与气体分子之间的疏水相互作用密切相关,而影响解吸相的相互作用可能因五肽的性质而异。对奇偶效应中涉及的分子相互作用的深入了解将促进用于检测奇链代谢物的材料的开发,这可以提高气敏技术在健康监测应用中的准确性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
求助全文
约1分钟内获得全文 求助全文
来源期刊
Applied Physics Letters
Applied Physics Letters 物理-物理:应用
CiteScore
6.40
自引率
10.00%
发文量
1821
审稿时长
1.6 months
期刊介绍: Applied Physics Letters (APL) features concise, up-to-date reports on significant new findings in applied physics. Emphasizing rapid dissemination of key data and new physical insights, APL offers prompt publication of new experimental and theoretical papers reporting applications of physics phenomena to all branches of science, engineering, and modern technology. In addition to regular articles, the journal also publishes invited Fast Track, Perspectives, and in-depth Editorials which report on cutting-edge areas in applied physics. APL Perspectives are forward-looking invited letters which highlight recent developments or discoveries. Emphasis is placed on very recent developments, potentially disruptive technologies, open questions and possible solutions. They also include a mini-roadmap detailing where the community should direct efforts in order for the phenomena to be viable for application and the challenges associated with meeting that performance threshold. Perspectives are characterized by personal viewpoints and opinions of recognized experts in the field. Fast Track articles are invited original research articles that report results that are particularly novel and important or provide a significant advancement in an emerging field. Because of the urgency and scientific importance of the work, the peer review process is accelerated. If, during the review process, it becomes apparent that the paper does not meet the Fast Track criterion, it is returned to a normal track.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信