{"title":"Comparative analysis of rapid alkalinization factor peptide-triggered plant immunity in citrus and closely related species","authors":"Wenzhong Shen , Mengying Yuan , Lijuan Chen , Xinxin Zhang","doi":"10.1016/j.plaphy.2025.109941","DOIUrl":null,"url":null,"abstract":"<div><div>Rapid alkalinization factors (RALFs) are plant-derived, cysteine-rich small peptides that play crucial roles in plant development and immunity. However, their function in citrus immunity remains unexplored. This study systematically identified <em>RALF</em> family members in sweet orange, a cultivated citrus species, and five closely related species known for their strong resistance to citrus diseases. Most species contained 13 RALF genes, and their corresponding RALF orthologs exhibited minimal variation in gene structure, sequence identity, conserved domains, and motifs. However, differences in <em>cis</em>-acting elements within promoter regions led to differences in their expression patterns under biotic stress. Compared with sweet orange, citrus-related species exhibited a stronger and more widespread induction of <em>RALF</em> genes. Additionally, RALF peptides, particularly RALF11, triggered more robust immune responses in these species, including ROS bursts, mitogen-activated protein kinase activation, and the upregulation of defense-related genes. Furthermore, the basal expression levels of <em>CrRLK1Ls</em>, the <em>RALF</em> receptor homologs, were higher in citrus-related species than in sweet orange. Amplifying the <em>RALF-CrRLK1L</em> pathway through <em>CrRLK1L</em> overexpression and <em>RALF</em> peptide application significantly enhanced sweet orange resistance to citrus canker. These findings suggest that citrus-related species have endured selective pressure, leading to greater promoter sequence diversity, which is conducive to fine-tune gene expression in response to environmental challenges.</div></div>","PeriodicalId":20234,"journal":{"name":"Plant Physiology and Biochemistry","volume":"224 ","pages":"Article 109941"},"PeriodicalIF":6.1000,"publicationDate":"2025-04-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Plant Physiology and Biochemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0981942825004693","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"PLANT SCIENCES","Score":null,"Total":0}
引用次数: 0
Abstract
Rapid alkalinization factors (RALFs) are plant-derived, cysteine-rich small peptides that play crucial roles in plant development and immunity. However, their function in citrus immunity remains unexplored. This study systematically identified RALF family members in sweet orange, a cultivated citrus species, and five closely related species known for their strong resistance to citrus diseases. Most species contained 13 RALF genes, and their corresponding RALF orthologs exhibited minimal variation in gene structure, sequence identity, conserved domains, and motifs. However, differences in cis-acting elements within promoter regions led to differences in their expression patterns under biotic stress. Compared with sweet orange, citrus-related species exhibited a stronger and more widespread induction of RALF genes. Additionally, RALF peptides, particularly RALF11, triggered more robust immune responses in these species, including ROS bursts, mitogen-activated protein kinase activation, and the upregulation of defense-related genes. Furthermore, the basal expression levels of CrRLK1Ls, the RALF receptor homologs, were higher in citrus-related species than in sweet orange. Amplifying the RALF-CrRLK1L pathway through CrRLK1L overexpression and RALF peptide application significantly enhanced sweet orange resistance to citrus canker. These findings suggest that citrus-related species have endured selective pressure, leading to greater promoter sequence diversity, which is conducive to fine-tune gene expression in response to environmental challenges.
期刊介绍:
Plant Physiology and Biochemistry publishes original theoretical, experimental and technical contributions in the various fields of plant physiology (biochemistry, physiology, structure, genetics, plant-microbe interactions, etc.) at diverse levels of integration (molecular, subcellular, cellular, organ, whole plant, environmental). Opinions expressed in the journal are the sole responsibility of the authors and publication does not imply the editors'' agreement.
Manuscripts describing molecular-genetic and/or gene expression data that are not integrated with biochemical analysis and/or actual measurements of plant physiological processes are not suitable for PPB. Also "Omics" studies (transcriptomics, proteomics, metabolomics, etc.) reporting descriptive analysis without an element of functional validation assays, will not be considered. Similarly, applied agronomic or phytochemical studies that generate no new, fundamental insights in plant physiological and/or biochemical processes are not suitable for publication in PPB.
Plant Physiology and Biochemistry publishes several types of articles: Reviews, Papers and Short Papers. Articles for Reviews are either invited by the editor or proposed by the authors for the editor''s prior agreement. Reviews should not exceed 40 typewritten pages and Short Papers no more than approximately 8 typewritten pages. The fundamental character of Plant Physiology and Biochemistry remains that of a journal for original results.