Accelerating the Raman spectroscopic discrimination of normal and cancerous tissues with low-rank constraint

IF 2.2 3区 物理与天体物理 Q2 OPTICS
Lang Huang , Xinhang Lou , Huijie Wang , Xu Liu , Suwei Zhou , Jinjin Wu , Linwei Shang , Jianhua Yin
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引用次数: 0

Abstract

Raman spectroscopic detection has been extensively validated as a potentially powerful analytical tool for high-efficiency cancer diagnosis. However, Raman scattering is inherently weak, and consequently Raman signal differences between normal and cancerous tissues are easily submerged in the random detecting noise. In order to improve the signal-to-noise ratio, Raman spectral acquisition is generally performed with a relatively long integration time, which strongly hinders the rapid discrimination of normal and cancerous tissues and probably photodamages the tissues under the long-time laser irradiation. In this work, spectral denoising based on low-rank constraint has been investigated and compared with the classical Savitzky–Golay smoothing and wavelet-transform denoising, demonstrating better performance in terms of spectral quality and tissue discrimination as well as simplicity of parameter selection. Specifically, Raman spectra of normal and osteosarcoma tissues were captured with the micro-Raman spectral system, and then classified using the unsupervised K-means clustering. As a result, the spectral classification following the low-rank denoising can remain accurate, even when shortening the integration time by more than 2 orders of magnitude, i.e. from 120 s to 1 s. With the help of low-rank SNR enhancement, Raman spectroscopic detection can be significantly accelerated, presumably promoting the application of Raman imaging to characterize the tissue heterogeneity for more accurate cancer diagnosis.
加速低秩约束下正常组织和癌变组织的拉曼光谱鉴别
拉曼光谱检测已被广泛验证为一种潜在的强大的分析工具,用于高效率的癌症诊断。然而,拉曼散射本身就很弱,因此正常组织和癌组织之间的拉曼信号差异很容易被淹没在随机检测噪声中。为了提高信噪比,拉曼光谱采集通常需要较长的积分时间,这严重阻碍了正常组织和癌变组织的快速区分,并且可能在长时间激光照射下对组织造成光损伤。本文对基于低秩约束的光谱去噪进行了研究,并与经典的Savitzky-Golay平滑和小波变换去噪进行了比较,结果表明,基于低秩约束的光谱去噪在光谱质量和组织识别方面具有更好的性能,且参数选择简单。具体而言,使用微拉曼光谱系统捕获正常组织和骨肉瘤组织的拉曼光谱,然后使用无监督K-means聚类进行分类。因此,即使将积分时间缩短2个数量级以上,即从120秒缩短到1秒,低秩去噪后的光谱分类仍能保持准确。在低阶信噪比增强的帮助下,拉曼光谱检测可以显著加快,可能会促进拉曼成像在组织异质性表征中的应用,从而更准确地诊断癌症。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Optics Communications
Optics Communications 物理-光学
CiteScore
5.10
自引率
8.30%
发文量
681
审稿时长
38 days
期刊介绍: Optics Communications invites original and timely contributions containing new results in various fields of optics and photonics. The journal considers theoretical and experimental research in areas ranging from the fundamental properties of light to technological applications. Topics covered include classical and quantum optics, optical physics and light-matter interactions, lasers, imaging, guided-wave optics and optical information processing. Manuscripts should offer clear evidence of novelty and significance. Papers concentrating on mathematical and computational issues, with limited connection to optics, are not suitable for publication in the Journal. Similarly, small technical advances, or papers concerned only with engineering applications or issues of materials science fall outside the journal scope.
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