Improving spectroscopic detection limits with multi-pixel signal-to-noise ratio calculations: Application to the SHERLOC instrument aboard the perseverance rover
Ryan S. Jakubek , Rohit Bhartia , Andrew Steele , Sanford A. Asher , William Abbey , Sergei V. Bykov , Andrew D. Czaja , Marc D. Fries , Carina Lee , Francis M. McCubbin , Michelle Minitti , Sunanda Sharma , Kyle Uckert
{"title":"Improving spectroscopic detection limits with multi-pixel signal-to-noise ratio calculations: Application to the SHERLOC instrument aboard the perseverance rover","authors":"Ryan S. Jakubek , Rohit Bhartia , Andrew Steele , Sanford A. Asher , William Abbey , Sergei V. Bykov , Andrew D. Czaja , Marc D. Fries , Carina Lee , Francis M. McCubbin , Michelle Minitti , Sunanda Sharma , Kyle Uckert","doi":"10.1016/j.aca.2025.344072","DOIUrl":null,"url":null,"abstract":"<div><h3>Background</h3><div>The Scanning Habitable Environments with Raman and Luminescence for Organics and Chemicals (SHERLOC) instrument on NASA's Perseverance rover is a deep ultraviolet Raman and fluorescence instrument used for organic and mineral mapping of the Martian surface. Flight instrument design and operational constraints lead to observations with low signal Raman features that must be statistically differentiated from measurement noise. There are many methods to calculate signal-to-noise ratios (SNR) in the Raman literature and we find that these are not equivalent. <strong>Thus, there is a need to 1) understand the differences and assumptions within SNR calculations, 2) aid in the comparison of SNR values across literature, and 3) identify SNR calculation methods that optimize limit-of-detection (LOD) based on the instrument characteristics.</strong></div></div><div><h3>Result</h3><div>We quantitatively compare methods in which signal-to-noise ratios (SNR) are calculated in Raman spectroscopy. Methods are separated into two broad categories, multi-pixel methods that utilize information across the full Raman bandwidth and single-pixel methods that use only the center pixel in the Raman band. We compare three SNR calculation methods on a standardized SHERLOC data set and show that multi-pixel methods detect spectral bands prior to single-pixel methods. This occurs because single-pixel methods only include signal from one pixel, ignoring the remaining signal across the bandwidth. While the manuscript focuses on Raman spectroscopy for application to SHERLOC data, the SNR calculation methodology can be utilized by any technique that reports spectral data.</div></div><div><h3>Significance</h3><div>This work is the first to report significant differences between methods of calculating spectroscopic SNR. This manuscript is of broad application with at least 3 points of major impact: 1) different SNR calculation methods are not equivalent and cannot be compared across literature, 2) multi-pixel SNR methods include signal from across the entire Raman bandwidth, improving the assessment of spectral features compared to single-pixel methods, and 3) we confirm a SHERLOC signal previously interpreted as the first Raman detection of organic carbon on the martian surface.</div></div>","PeriodicalId":240,"journal":{"name":"Analytica Chimica Acta","volume":"1357 ","pages":"Article 344072"},"PeriodicalIF":5.7000,"publicationDate":"2025-04-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Analytica Chimica Acta","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0003267025004660","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"CHEMISTRY, ANALYTICAL","Score":null,"Total":0}
引用次数: 0
Abstract
Background
The Scanning Habitable Environments with Raman and Luminescence for Organics and Chemicals (SHERLOC) instrument on NASA's Perseverance rover is a deep ultraviolet Raman and fluorescence instrument used for organic and mineral mapping of the Martian surface. Flight instrument design and operational constraints lead to observations with low signal Raman features that must be statistically differentiated from measurement noise. There are many methods to calculate signal-to-noise ratios (SNR) in the Raman literature and we find that these are not equivalent. Thus, there is a need to 1) understand the differences and assumptions within SNR calculations, 2) aid in the comparison of SNR values across literature, and 3) identify SNR calculation methods that optimize limit-of-detection (LOD) based on the instrument characteristics.
Result
We quantitatively compare methods in which signal-to-noise ratios (SNR) are calculated in Raman spectroscopy. Methods are separated into two broad categories, multi-pixel methods that utilize information across the full Raman bandwidth and single-pixel methods that use only the center pixel in the Raman band. We compare three SNR calculation methods on a standardized SHERLOC data set and show that multi-pixel methods detect spectral bands prior to single-pixel methods. This occurs because single-pixel methods only include signal from one pixel, ignoring the remaining signal across the bandwidth. While the manuscript focuses on Raman spectroscopy for application to SHERLOC data, the SNR calculation methodology can be utilized by any technique that reports spectral data.
Significance
This work is the first to report significant differences between methods of calculating spectroscopic SNR. This manuscript is of broad application with at least 3 points of major impact: 1) different SNR calculation methods are not equivalent and cannot be compared across literature, 2) multi-pixel SNR methods include signal from across the entire Raman bandwidth, improving the assessment of spectral features compared to single-pixel methods, and 3) we confirm a SHERLOC signal previously interpreted as the first Raman detection of organic carbon on the martian surface.
期刊介绍:
Analytica Chimica Acta has an open access mirror journal Analytica Chimica Acta: X, sharing the same aims and scope, editorial team, submission system and rigorous peer review.
Analytica Chimica Acta provides a forum for the rapid publication of original research, and critical, comprehensive reviews dealing with all aspects of fundamental and applied modern analytical chemistry. The journal welcomes the submission of research papers which report studies concerning the development of new and significant analytical methodologies. In determining the suitability of submitted articles for publication, particular scrutiny will be placed on the degree of novelty and impact of the research and the extent to which it adds to the existing body of knowledge in analytical chemistry.