Molecular evolution of coxsackievirus A6 associated with atypical hand, foot, and mouth disease in Northern Brazil in 2019

IF 2.5 4区 医学 Q3 VIROLOGY
Raiana Scerni Machado, Ivanildo Pedro de Sousa, Wanderley Dias das Chagas Júnior, James Lima Ferreira, Daniela Pereira Lopes, Maria Cleonice Aguiar Justino, Fernando Neto Tavares
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引用次数: 0

Abstract

Globally, coxsackievirus A6 (CVA6) is a major cause of hand, foot, and mouth disease (HFMD) outbreaks, although studies on its evolutionary and transmission dynamics are limited. Here, we analyzed samples from atypical HFMD cases in Brazil. Enteroviruses were detected in 49.2% (156/317) of the specimens, with CVA6 being the primary pathogen. Phylogenetic analysis based on VP1 gene sequences revealed that Brazilian CVA6 isolates belonged to the lineage D3 and were divided into two distinct clades from different regions. Temporal analysis indicated that the most recent common ancestor dates back 72 years and that there has been stable coevolution of genotypes. These findings shed light on the epidemiological dynamics of CVA6 and highlight the importance of surveillance of atypical HFMD cases.

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来源期刊
Archives of Virology
Archives of Virology 医学-病毒学
CiteScore
5.10
自引率
7.40%
发文量
324
审稿时长
4.5 months
期刊介绍: Archives of Virology publishes original contributions from all branches of research on viruses, virus-like agents, and virus infections of humans, animals, plants, insects, and bacteria. Coverage spans a broad spectrum of topics, from descriptions of newly discovered viruses, to studies of virus structure, composition, and genetics, to studies of virus interactions with host cells, organisms and populations. Studies employ molecular biologic, molecular genetics, and current immunologic and epidemiologic approaches. Contents include studies on the molecular pathogenesis, pathophysiology, and genetics of virus infections in individual hosts, and studies on the molecular epidemiology of virus infections in populations. Also included are studies involving applied research such as diagnostic technology development, monoclonal antibody panel development, vaccine development, and antiviral drug development.Archives of Virology wishes to publish obituaries of recently deceased well-known virologists and leading figures in virology.
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