{"title":"Elucidating the genetic mechanism of anti-cancer efficacy of prednisolone in acute lymphoblastic leukemia through anti-miRNA treatments","authors":"Neslihan Pinar Ozates , Bakiye Goker Bagca , Duygu Arican , Burak Ascioglu , Burak Durmaz","doi":"10.1016/j.genrep.2025.102221","DOIUrl":null,"url":null,"abstract":"<div><h3>Background/aim</h3><div>Acute lymphoblastic leukemia (ALL) is a form of hematological cancer that primarily affects children. Although agents such as prednisolone are used in the treatment of this disease, chemotherapy resistance remains a concern. This study aims to elucidate the genetic mechanism underlying the previously demonstrated anticancer efficacy of anti-miRNA therapies in ALL.</div></div><div><h3>Materials and methods</h3><div>Using IPA software, we identified genes targeted by miRNAs with demonstrated anticancer activity. For modeling ALL, SUP-B15 cells were employed, whereas NCI-BL2171 cells were used to represent healthy B lymphocytes. Commercial miRNA inhibitors and Lipofectamine were used to perform the transfection. RT-qPCR was used to assess target gene expression, and fold changes were calculated using the 2<sup>-ΔΔCt</sup> method.</div></div><div><h3>Results</h3><div>In the SUP-B15 cell line, <em>MYO10</em> gene expression was downregulated, whereas TAB2 gene expression was upregulated following the silencing of the ALL-related miRNAs in both ALL and healthy cell models<strong>.</strong> In the healthy NCI-BL2171 cell line, <em>MYO10</em> gene expression was increased.</div></div><div><h3>Conclusion</h3><div>Genomic instability resulting from <em>MYO10</em> dysregulation promotes tumor growth and contributes to immune checkpoint blockade. <em>TAB2</em> plays a role in regulating the hematopoietic system, either directly or indirectly. Understanding the functions of these genes may provide valuable insights into the mechanisms underlying cancer and hematopoiesis, potentially leading to the development of new therapies for these conditions. The mechanisms of miRNA dysregulation in ALL remain to be elucidated, and anti-miRNA-based treatments need to be developed.</div></div>","PeriodicalId":12673,"journal":{"name":"Gene Reports","volume":"39 ","pages":"Article 102221"},"PeriodicalIF":1.0000,"publicationDate":"2025-04-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gene Reports","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2452014425000949","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q4","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0
Abstract
Background/aim
Acute lymphoblastic leukemia (ALL) is a form of hematological cancer that primarily affects children. Although agents such as prednisolone are used in the treatment of this disease, chemotherapy resistance remains a concern. This study aims to elucidate the genetic mechanism underlying the previously demonstrated anticancer efficacy of anti-miRNA therapies in ALL.
Materials and methods
Using IPA software, we identified genes targeted by miRNAs with demonstrated anticancer activity. For modeling ALL, SUP-B15 cells were employed, whereas NCI-BL2171 cells were used to represent healthy B lymphocytes. Commercial miRNA inhibitors and Lipofectamine were used to perform the transfection. RT-qPCR was used to assess target gene expression, and fold changes were calculated using the 2-ΔΔCt method.
Results
In the SUP-B15 cell line, MYO10 gene expression was downregulated, whereas TAB2 gene expression was upregulated following the silencing of the ALL-related miRNAs in both ALL and healthy cell models. In the healthy NCI-BL2171 cell line, MYO10 gene expression was increased.
Conclusion
Genomic instability resulting from MYO10 dysregulation promotes tumor growth and contributes to immune checkpoint blockade. TAB2 plays a role in regulating the hematopoietic system, either directly or indirectly. Understanding the functions of these genes may provide valuable insights into the mechanisms underlying cancer and hematopoiesis, potentially leading to the development of new therapies for these conditions. The mechanisms of miRNA dysregulation in ALL remain to be elucidated, and anti-miRNA-based treatments need to be developed.
Gene ReportsBiochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.30
自引率
7.70%
发文量
246
审稿时长
49 days
期刊介绍:
Gene Reports publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses. Gene Reports strives to be a very diverse journal and topics in all fields will be considered for publication. Although not limited to the following, some general topics include: DNA Organization, Replication & Evolution -Focus on genomic DNA (chromosomal organization, comparative genomics, DNA replication, DNA repair, mobile DNA, mitochondrial DNA, chloroplast DNA). Expression & Function - Focus on functional RNAs (microRNAs, tRNAs, rRNAs, mRNA splicing, alternative polyadenylation) Regulation - Focus on processes that mediate gene-read out (epigenetics, chromatin, histone code, transcription, translation, protein degradation). Cell Signaling - Focus on mechanisms that control information flow into the nucleus to control gene expression (kinase and phosphatase pathways controlled by extra-cellular ligands, Wnt, Notch, TGFbeta/BMPs, FGFs, IGFs etc.) Profiling of gene expression and genetic variation - Focus on high throughput approaches (e.g., DeepSeq, ChIP-Seq, Affymetrix microarrays, proteomics) that define gene regulatory circuitry, molecular pathways and protein/protein networks. Genetics - Focus on development in model organisms (e.g., mouse, frog, fruit fly, worm), human genetic variation, population genetics, as well as agricultural and veterinary genetics. Molecular Pathology & Regenerative Medicine - Focus on the deregulation of molecular processes in human diseases and mechanisms supporting regeneration of tissues through pluripotent or multipotent stem cells.