A broadly protective human antibody for GI genogroup noroviruses

IF 20.5 1区 生物学 Q1 MICROBIOLOGY
Inga Rimkute, Adam S. Olia, Mehin Suleiman, Kamron D. Woods, Tatsiana Bylund, Nicholas C. Morano, Ena S. Tully, Raffaello Verardi, Saran Bao, Margaret H. Beddall, Natthawan Chaimongkol, Mitzi M. Donaldson, Renguang Du, Caitlyn N. M. Dulan, Jason Gorman, Amy R. Henry, Chaim A. Schramm, Stanislav V. Sosnovtsev, Tyler Stephens, John-Paul Todd, Yaroslav Tsybovsky, Daniel C. Douek, Kim Y. Green, Reda Rawi, Lawrence Shapiro, Tongqing Zhou, Peter D. Kwong, Mario Roederer
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Abstract

Noroviruses infect millions each year, and while effective countermeasures are eagerly sought, none have been reported for the GI genogroup, first described more than 50 years ago. Here, to provide insight into GI norovirus neutralization, we isolated a broad GI antibody, 16E10, from a human blood donor and showed it neutralizes noroviruses in human enteroid cultures and abrogates or reduces infection in rhesus macaques. The cryogenic electron microscopy reconstruction of 16E10 with a norovirus protruding-domain dimer at 2.56-Å resolution reveals an exceptionally large binding surface, overlapping an antibody supersite, distal from host receptor-binding or cofactor-binding sites. Cryogenic electron microscopy reconstructions with virus-like particles (VLPs) showed that 16E10 disrupts protruding domains on the VLP surface and disassembles VLPs, altering viral organization required for avidity. While its epitope was generally conserved, 16E10 recognized multiple sequence-divergent residues, binding to which was enabled by corresponding cavities in the 16E10–norovirus interface. Broad recognition of noroviruses can thus incorporate sequence-divergent residues, through a cavity-based mechanism of diversity tolerance.

Abstract Image

一种针对消化道基因组诺罗病毒的广泛保护性人类抗体
诺如病毒每年感染数百万人,尽管人们迫切地寻求有效的对策,但尚未有针对GI基因组的报道,该基因组最早是在50多年前被描述的。为了深入了解胃肠道诺如病毒的中和作用,我们从一名人类献血者身上分离出一种广泛的胃肠道抗体16E10,并证明它可以中和人类肠道培养物中的诺如病毒,并消除或减少恒河猴的感染。用诺如病毒突出结构域二聚体在2.56-Å分辨率下对16E10进行低温电镜重建,发现一个异常大的结合表面,重叠一个抗体超位点,远离宿主受体结合位点或辅因子结合位点。用病毒样颗粒(VLP)进行的低温电子显微镜重建显示,16E10破坏了VLP表面的突出结构域并分解了VLP,改变了病毒的组织结构。虽然其表位通常是保守的,但16E10识别多个序列发散残基,通过16E10 -诺如病毒界面上相应的空腔使其结合。因此,对诺如病毒的广泛识别可以通过基于空腔的多样性耐受机制纳入序列发散残基。
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来源期刊
Nature Microbiology
Nature Microbiology Immunology and Microbiology-Microbiology
CiteScore
44.40
自引率
1.10%
发文量
226
期刊介绍: Nature Microbiology aims to cover a comprehensive range of topics related to microorganisms. This includes: Evolution: The journal is interested in exploring the evolutionary aspects of microorganisms. This may include research on their genetic diversity, adaptation, and speciation over time. Physiology and cell biology: Nature Microbiology seeks to understand the functions and characteristics of microorganisms at the cellular and physiological levels. This may involve studying their metabolism, growth patterns, and cellular processes. Interactions: The journal focuses on the interactions microorganisms have with each other, as well as their interactions with hosts or the environment. This encompasses investigations into microbial communities, symbiotic relationships, and microbial responses to different environments. Societal significance: Nature Microbiology recognizes the societal impact of microorganisms and welcomes studies that explore their practical applications. This may include research on microbial diseases, biotechnology, or environmental remediation. In summary, Nature Microbiology is interested in research related to the evolution, physiology and cell biology of microorganisms, their interactions, and their societal relevance.
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