Comprehensive serotyping of Mannheimia haemolytica by a PCR system using the diversity of capsule biosynthesis genes.

IF 3.8 2区 综合性期刊 Q1 MULTIDISCIPLINARY SCIENCES
Atsushi Iguchi, Yuichi Ueno, Kaori Hoshinoo, Miki Okuno, Ryoko Uemura, Garam You, Yoshitoshi Ogura, Daisuke Takamatsu
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Abstract

The bovine respiratory disease complex (BRDC) is a global issue affecting dairy and beef farms and is of major concern due to the high morbidity and mortality rates in calves, as well as decreased production it causes, resulting in significant economic losses. Mannheimia haemolytica is one of the secondary pathogens associated with BRDC. M. haemolytica is classified into 12 serotypes based on capsular antigens. In addition to the prevalent serotypes A1, A2, and A6, strains belonging to other serotypes also cause respiratory diseases in cattle and other ruminants, necessitating a method for their rapid and easy identification. In this study, we organized the capsule biosynthesis genes based on genome information from all serotype strains and designed 11 PCR primer pairs targeting serotype-specific genes, which could individually identify serotypes A14/A16, which possess homologous genes, as well as all other serotypes. Additionally, we developed two multiplex PCR kits that include these serotype-specific and M. haemolytica species-specific primers. Specificity testing using reference strains confirmed that these kits can simultaneously and clearly identify both the species and their serotypes. The PCR-based system described here could be a valuable tool for subtyping M. haemolytica strains in epidemiological studies and surveillance efforts in cattle and other reservoir animals. This study also carefully compared and discussed the differences between the capsule synthesis genes of A8 and A14 from previously published and those obtained in this study.

利用胶囊生物合成基因多样性的PCR系统对溶血性曼海姆病进行综合血清分型。
牛呼吸道疾病(BRDC)是影响奶牛场和肉牛养殖场的全球性问题,由于小牛发病率和死亡率高,以及它造成的产量下降,造成重大经济损失,因此引起重大关注。溶血性曼海姆病是与BRDC相关的继发病原体之一。溶血分枝杆菌根据荚膜抗原分为12种血清型。除流行的A1、A2和A6血清型外,属于其他血清型的菌株也会引起牛和其他反刍动物的呼吸道疾病,因此需要一种快速简便的鉴定方法。在本研究中,我们根据所有血清型菌株的基因组信息组织了胶囊生物合成基因,设计了11对针对血清型特异性基因的PCR引物,可以单独鉴定具有同源基因的A14/A16血清型,以及所有其他血清型。此外,我们开发了两种多重PCR试剂盒,包括这些血清型特异性和溶血支原体物种特异性引物。使用参考菌株进行特异性检测,证实这些试剂盒可以同时清晰地识别菌种及其血清型。本文描述的基于聚合酶链反应的系统可作为流行病学研究和牛及其他储层动物监测工作中溶血支原体菌株分型的宝贵工具。本研究还仔细比较和讨论了先前发表的A8和A14的胶囊合成基因与本研究获得的基因的差异。
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来源期刊
Scientific Reports
Scientific Reports Natural Science Disciplines-
CiteScore
7.50
自引率
4.30%
发文量
19567
审稿时长
3.9 months
期刊介绍: We publish original research from all areas of the natural sciences, psychology, medicine and engineering. You can learn more about what we publish by browsing our specific scientific subject areas below or explore Scientific Reports by browsing all articles and collections. Scientific Reports has a 2-year impact factor: 4.380 (2021), and is the 6th most-cited journal in the world, with more than 540,000 citations in 2020 (Clarivate Analytics, 2021). •Engineering Engineering covers all aspects of engineering, technology, and applied science. It plays a crucial role in the development of technologies to address some of the world''s biggest challenges, helping to save lives and improve the way we live. •Physical sciences Physical sciences are those academic disciplines that aim to uncover the underlying laws of nature — often written in the language of mathematics. It is a collective term for areas of study including astronomy, chemistry, materials science and physics. •Earth and environmental sciences Earth and environmental sciences cover all aspects of Earth and planetary science and broadly encompass solid Earth processes, surface and atmospheric dynamics, Earth system history, climate and climate change, marine and freshwater systems, and ecology. It also considers the interactions between humans and these systems. •Biological sciences Biological sciences encompass all the divisions of natural sciences examining various aspects of vital processes. The concept includes anatomy, physiology, cell biology, biochemistry and biophysics, and covers all organisms from microorganisms, animals to plants. •Health sciences The health sciences study health, disease and healthcare. This field of study aims to develop knowledge, interventions and technology for use in healthcare to improve the treatment of patients.
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