Thermal Folding of Peptides into Single α-Helical Turns.

IF 2.6 4区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
ChemBioChem Pub Date : 2025-04-08 DOI:10.1002/cbic.202500050
Erode N Prabhakaran, Ankur Kumar
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引用次数: 0

Abstract

Single α-helical turns (SαHT) are biorelevant peptide structures with potential applications in drug design. We envisioned augmented applications for thermal folding (T-folding) SαHT, wherein, a dynamic SαHT in equilibrium with non-helical conformers can be biased to favor SαHT by increasing the temperature. Short peptides cannot fold into native SαHT due to large conformational entropy. Covalent hydrogen bond surrogates (HBS) for the peptide H-bond have been designed to counter the entropy and enable such SαHT folds. Here, HBS-constrained SαHT are synthesized. NMR, CD spectral and computational analyses reveal their existence in a SαHT conformer which is in equilibrium with non-helical conformers. Temperature-dependent spectral analyses reveal their T-folding behaviour, the extent of which can be controlled by varying the number of Cα-substituents at the i+1st and i+2nd residues and solvent polarities. The conformational transition of the minor non-helical conformers to SαHT with increasing temperature, is at the origin of T-folding. T-folding molecules can uniquely serve as therapeutics with thermally augmentable potencies.

肽热折叠成单个α-螺旋匝。
单α-螺旋结构(s - α ht)是与生物相关的肽结构,在药物设计中具有潜在的应用前景。我们设想了热折叠(t折叠)s - α ht的扩展应用,其中,与非螺旋构象平衡的动态s - α ht可以通过增加温度来偏向s - α ht。由于大的构象熵,短肽不能折叠成天然的s - α ht。设计了共价氢键替代物(HBS)来代替肽氢键,以抵消熵并使s - α ht折叠。本文合成了hbs约束的s - α ht。核磁共振、CD谱和计算分析表明它们存在于与非螺旋构象平衡的SαHT构象中。温度相关的光谱分析揭示了它们的t折叠行为,其程度可以通过改变i+1和i+2残基上c - α-取代基的数量和溶剂极性来控制。随着温度的升高,少量非螺旋构象向s - α ht的构象转变是t折叠的起源。t折叠分子可以独特地作为具有热增强效力的治疗药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
ChemBioChem
ChemBioChem 生物-生化与分子生物学
CiteScore
6.10
自引率
3.10%
发文量
407
审稿时长
1 months
期刊介绍: ChemBioChem (Impact Factor 2018: 2.641) publishes important breakthroughs across all areas at the interface of chemistry and biology, including the fields of chemical biology, bioorganic chemistry, bioinorganic chemistry, synthetic biology, biocatalysis, bionanotechnology, and biomaterials. It is published on behalf of Chemistry Europe, an association of 16 European chemical societies, and supported by the Asian Chemical Editorial Society (ACES).
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