Identification of Serum Metabolites to Improve Diagnostic Efficacy in Pulmonary Embolism

IF 3.6 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Shili Chen, Xue Xu, Xiaoming Li, Qiangqiang Qin, Guiyin Zhu, Haiyang Yu, Kun Du, Xueting Wang*, Wenjing Ye* and Wen Gu*, 
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Abstract

Pulmonary embolism (PE) is a life-threatening disease. Our aim was to search for potential biomarkers by using modern high-throughput metabolomics methods to improve diagnostic efficacy. The discovery cohort included 60 participants, including 30 PE patients and 30 healthy individuals. The validation cohort included 40 participants, including 20 PE patients and 20 healthy individuals. Gas chromatography–mass spectrometry (GC-MS) was combined with multivariate data analysis to determine serum metabolic profiles in patients with PE and healthy controls. The distribution of metabolic profiles in the two cohorts was assessed by unsupervised principal component analysis (PCA) and supervised partial least-squares discriminant analysis (PLS-DA). Sixteen metabolites were initially selected from the ranked variable of predictive importance (VIP) scores and applied to the correlation analysis of PE-related clinical indicators. Four metabolites that were correlated with D-dimer levels were selected, including l-tryptophan, N-alpha-acetyl-l-lysine, dopamine, and N2-acetylornithine. Finally, the AUC values were calculated to be 0.958 (95% CI: 0.9072–1) for the combined biomarker panel, including the 4 specific metabolites in the discovery cohort, and 0.963 (95% CI: 0.9122–1) in the validation cohort. The results suggest that these four specific metabolites can be used as diagnostic biomarkers to improve diagnostic efficacy in pulmonary embolism.

Abstract Image

血清代谢物鉴定提高肺栓塞诊断效能
肺栓塞是一种危及生命的疾病。我们的目的是通过使用现代高通量代谢组学方法来寻找潜在的生物标志物,以提高诊断效率。发现队列包括60名参与者,包括30名PE患者和30名健康个体。验证队列包括40名参与者,包括20名PE患者和20名健康个体。气相色谱-质谱(GC-MS)结合多变量数据分析来确定PE患者和健康对照者的血清代谢谱。通过无监督主成分分析(PCA)和监督偏最小二乘判别分析(PLS-DA)评估两个队列的代谢谱分布。首先从预测重要性(VIP)评分排序变量中选择16种代谢物,应用于pe相关临床指标的相关性分析。选择了四种与d -二聚体水平相关的代谢物,包括l-色氨酸、n - α -乙酰-赖氨酸、多巴胺和n2 -乙酰氨酸。最后,计算出联合生物标志物面板的AUC值为0.958 (95% CI: 0.9072-1),包括发现队列中的4种特定代谢物,验证队列中的AUC值为0.963 (95% CI: 0.9122-1)。结果提示,这四种特异性代谢物可作为诊断性生物标志物,提高肺栓塞的诊断效能。
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来源期刊
Journal of Proteome Research
Journal of Proteome Research 生物-生化研究方法
CiteScore
9.00
自引率
4.50%
发文量
251
审稿时长
3 months
期刊介绍: Journal of Proteome Research publishes content encompassing all aspects of global protein analysis and function, including the dynamic aspects of genomics, spatio-temporal proteomics, metabonomics and metabolomics, clinical and agricultural proteomics, as well as advances in methodology including bioinformatics. The theme and emphasis is on a multidisciplinary approach to the life sciences through the synergy between the different types of "omics".
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