Molecular docking analysis of breast cancer target RAC1B with ligands.

IF 1.9
Bioinformation Pub Date : 2024-11-05 eCollection Date: 2024-01-01 DOI:10.6026/9732063002001467
Kajal Verma, Lakshmi Pillai
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引用次数: 0

Abstract

Breast cancer is a malignant neoplasm that arises from the breast tissue, and the best chemotherapy preventive approach is to identify potent inhibitors. In this study, focusing on the Rac1b protein may be an effective approach to developing drug alternatives to treat breast cancer, and we have employed structure-based drug design with the available drugs. Afterwards, molecular docking was used to identify novel inhibitors, and in order to compute the drug likeness and medicinal chemistry, the best-docked complex was put through ADMET studies followed by molecular dynamics simulations to check the stability of the protein-ligand complex using RMSD, RMSF and protein-ligand interactions. Therefore, it is of interest to report the molecular docking analysis of breast cancer target RAC1B with ligands. Here, data shows that the therapeutic compounds that were evaluated showed greater stability in comparison to the reported compounds, EHop-016 and has found promising medication possibilities for breast cancer that target Rac1b.

乳腺癌靶点RAC1B与配体的分子对接分析。
乳腺癌是一种起源于乳腺组织的恶性肿瘤,最好的化疗预防方法是确定有效的抑制剂。在本研究中,关注Rac1b蛋白可能是开发治疗乳腺癌的替代药物的有效途径,我们对现有药物采用了基于结构的药物设计。随后,利用分子对接方法鉴定新型抑制剂,为了计算药物相似性和药物化学,将最佳对接物进行ADMET研究,然后通过RMSD、RMSF和蛋白质-配体相互作用进行分子动力学模拟,检查蛋白质-配体复合物的稳定性。因此,报道乳腺癌靶点RAC1B与配体的分子对接分析具有重要意义。在这里,数据显示,与已报道的化合物EHop-016相比,被评估的治疗性化合物显示出更大的稳定性,并且发现了针对Rac1b的有希望的乳腺癌药物可能性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Bioinformation
Bioinformation MATHEMATICAL & COMPUTATIONAL BIOLOGY-
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