Tapping natures rhythm: the role of season in mitochondrial function and genetics in the UK biobank.

IF 3.8 3区 医学 Q2 GENETICS & HEREDITY
Anastasios Papadam, Mihail Mihov, Adriana Koller, Hansi Weissensteiner, Klaus Stark, Felix Grassmann
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引用次数: 0

Abstract

Background: Mitochondria are small organelles inside our cells crucial for producing energy and heat, cell signaling, production and degradation of important molecules, as well as cell death. The number of mitochondria in each cell is a marker for mitochondrial function, which generally declines with increasing age. However, we found that there is also a considerable seasonal variation of mitochondrial abundance, which warrants further research.

Methods: We leveraged data from individuals participating in the UK Biobank study and computed their mitochondrial abundance from Exome sequencing reads mapping to the mitochondrial genome. The seasonal effect was modelled as a sine-cosine function across the year and changes in amplitude, acrophase and displacement of mitochondrial abundance due to various demographic, lifestyle, genetic, proteomic, and metabolomic markers were investigated with multivariate regression.

Results: We found that mitochondrial DNA (mtDNA) abundance was higher in winter than in summer. This difference is related to advanced age, a higher BMI and smoking behavior which resulted in a reduced amplitude of mtDNA abundance. A higher education reduced the acrophase (i.e., shifted the distribution to earlier in the year) and a higher BMI and lack of physical activity led to a later acrophase. Generally, increased immune cell count resulted in lower amplitude, and an increased platelet and lymphocyte count was found to increase the acrophase. Importantly, a reduced seasonal amplitude was associated with increased risk for cardiovascular, digestive, genitourinary, and respiratory diseases as well as all-cause mortality. Most of the metabolomic and proteomic markers were associated with mtDNA displacement (i.e., increase of the baseline level) but not acrophase or amplitude. Similarly, we found that there are multiple genetic variants influencing displacement, but none reached genome-wide significance when investigating acrophase or amplitude.

Conclusion: Seasonal variation of mtDNA abundance is influenced by environmental, lifestyle and immune parameters. Differences in the seasonal oscillation of mitochondrial abundance could potentially explain discrepancies of previous associations results and might be useful to improve future risk prediction.

敲击自然节奏:季节在英国生物银行线粒体功能和遗传学中的作用。
背景:线粒体是我们细胞内的小细胞器,对产生能量和热量、细胞信号传导、重要分子的产生和降解以及细胞死亡至关重要。每个细胞中线粒体的数量是线粒体功能的标志,线粒体功能通常随着年龄的增长而下降。然而,我们发现线粒体丰度也有相当大的季节性变化,这值得进一步研究。方法:我们利用来自参与UK Biobank研究的个体的数据,并通过外显子组测序读取到线粒体基因组的图谱来计算他们的线粒体丰度。季节效应建模为全年的正弦余弦函数,并通过多变量回归研究了各种人口统计学、生活方式、遗传、蛋白质组学和代谢组学标志物对线粒体丰度的幅度、峰相和位移的影响。结果:线粒体DNA (mtDNA)丰度冬季高于夏季。这种差异与高龄、较高的BMI和吸烟行为有关,这些行为导致mtDNA丰度的幅度降低。高等教育减少了顶相(即,将分布转移到一年的早些时候),较高的BMI和缺乏体育活动导致顶相的推迟。一般情况下,免疫细胞数量增加导致振幅降低,血小板和淋巴细胞数量增加导致峰期增加。重要的是,季节性振幅的降低与心血管、消化系统、泌尿生殖系统和呼吸系统疾病以及全因死亡率的风险增加有关。大多数代谢组学和蛋白质组学标记与mtDNA位移(即基线水平的增加)有关,但与峰相或振幅无关。同样,我们发现有多个遗传变异影响位移,但在研究顶相或振幅时,没有一个达到全基因组意义。结论:mtDNA丰度的季节变化受环境、生活方式和免疫参数的影响。线粒体丰度的季节性波动差异可能潜在地解释先前关联结果的差异,并可能有助于改善未来的风险预测。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
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来源期刊
Human Genomics
Human Genomics GENETICS & HEREDITY-
CiteScore
6.00
自引率
2.20%
发文量
55
审稿时长
11 weeks
期刊介绍: Human Genomics is a peer-reviewed, open access, online journal that focuses on the application of genomic analysis in all aspects of human health and disease, as well as genomic analysis of drug efficacy and safety, and comparative genomics. Topics covered by the journal include, but are not limited to: pharmacogenomics, genome-wide association studies, genome-wide sequencing, exome sequencing, next-generation deep-sequencing, functional genomics, epigenomics, translational genomics, expression profiling, proteomics, bioinformatics, animal models, statistical genetics, genetic epidemiology, human population genetics and comparative genomics.
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