{"title":"MIP-based electrochemical sensor with machine learning for accurate ZIKV detection in protein- and glucose-rich urine","authors":"Wannisa Sukjee , Pichai Sirisangsawang , Chutima Thepparit , Prasert Auewarakul , Tasawan Puttasakul , Chak Sangma","doi":"10.1016/j.ab.2025.115854","DOIUrl":null,"url":null,"abstract":"<div><div>Nowadays, a multitude of biosensors are being developed worldwide. However, a significant challenge arises when these biosensors are tested in real sample environments, as many of them fail to perform as expected. This can lead to ambiguous results and raise concerns about their reliability. In many cases, further data analysis is required to enhance the clarity and meaningfulness of the outputs. In this study, we investigated the acrylamide-methacrylic acid-methyl methacrylate-vinylpyrrolidone copolymer for fabrication of molecularly imprinted polymers, aimed at developing electrochemical sensors for the direct detection Zika virus in urine. Here, Zika virus detection by the biosensor in three types of urine possibly found in clinical samples including normal, high glucose (glucose >540 mg/dL) and high protein urines (protein >100 mg/dL). The results show that the signal obtained from normal urine increased with virus concentration, while it decreased in urine with high glucose or high protein level. Support vector machine was introduced to unify two opposite trends and resolve ambiguity of the data. It was able to sift through the noise and extract valuable information, thereby improving the reliability and achieved 91 % accuracy in detecting the analyte spiked into real patient samples.</div></div>","PeriodicalId":7830,"journal":{"name":"Analytical biochemistry","volume":"702 ","pages":"Article 115854"},"PeriodicalIF":2.6000,"publicationDate":"2025-03-26","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":null,"platform":"Semanticscholar","paperid":null,"PeriodicalName":"Analytical biochemistry","FirstCategoryId":"99","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0003269725000922","RegionNum":4,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOCHEMICAL RESEARCH METHODS","Score":null,"Total":0}
引用次数: 0
Abstract
Nowadays, a multitude of biosensors are being developed worldwide. However, a significant challenge arises when these biosensors are tested in real sample environments, as many of them fail to perform as expected. This can lead to ambiguous results and raise concerns about their reliability. In many cases, further data analysis is required to enhance the clarity and meaningfulness of the outputs. In this study, we investigated the acrylamide-methacrylic acid-methyl methacrylate-vinylpyrrolidone copolymer for fabrication of molecularly imprinted polymers, aimed at developing electrochemical sensors for the direct detection Zika virus in urine. Here, Zika virus detection by the biosensor in three types of urine possibly found in clinical samples including normal, high glucose (glucose >540 mg/dL) and high protein urines (protein >100 mg/dL). The results show that the signal obtained from normal urine increased with virus concentration, while it decreased in urine with high glucose or high protein level. Support vector machine was introduced to unify two opposite trends and resolve ambiguity of the data. It was able to sift through the noise and extract valuable information, thereby improving the reliability and achieved 91 % accuracy in detecting the analyte spiked into real patient samples.
期刊介绍:
The journal''s title Analytical Biochemistry: Methods in the Biological Sciences declares its broad scope: methods for the basic biological sciences that include biochemistry, molecular genetics, cell biology, proteomics, immunology, bioinformatics and wherever the frontiers of research take the field.
The emphasis is on methods from the strictly analytical to the more preparative that would include novel approaches to protein purification as well as improvements in cell and organ culture. The actual techniques are equally inclusive ranging from aptamers to zymology.
The journal has been particularly active in:
-Analytical techniques for biological molecules-
Aptamer selection and utilization-
Biosensors-
Chromatography-
Cloning, sequencing and mutagenesis-
Electrochemical methods-
Electrophoresis-
Enzyme characterization methods-
Immunological approaches-
Mass spectrometry of proteins and nucleic acids-
Metabolomics-
Nano level techniques-
Optical spectroscopy in all its forms.
The journal is reluctant to include most drug and strictly clinical studies as there are more suitable publication platforms for these types of papers.