Fermi Hole Behavior in O–H···O and N–H···S Hydrogen Bonds: Equilibrium Points in the Electrostatic and Total Static Force Fields and the Electron Density Gradient as Reference Positions for the Probe Electron

IF 0.9 4区 化学 Q4 CHEMISTRY, MULTIDISCIPLINARY
A. P. Fedonin, S. V. Kartashov, R. R. Fayzullin
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Abstract

In this study, the distributions of the Fermi exchange hole density, associated with the three-center interactions O–H···O in the picolinic acid N-oxide molecule and N–H···S in the methimazole supramolecular dimer, were investigated. As reference points for the location of the probe electron, it was proposed to utilize the saddle and sink equilibrium points, which are defined within the vector fields of the per-electronic electrostatic force density, the per-electronic total static force density, and the electron density gradient. The reassignment of the probe electron from the covalent bond region to the hydrogen bond domain causes a sudden transformation of the Fermi exchange hole. Initially confined within the covalent bond, the exchange hole subsequently expands, encompassing both the hydrogen bond acceptor atom and the pair of hydrogen bond donor atoms. This phenomenon underscores the intrinsic three-center character of classical hydrogen bonding. Furthermore, along the bond line of each hydrogen bond, the distribution of the exchange hole density undergoes a smooth yet steady change as the probe electron transitions from one saddle-type equilibrium point to another, following the aforementioned sequence.

Abstract Image

O - h··O和N-H··S氢键中的费米空穴行为:静电和全静力场中的平衡点以及作为探针电子参考位置的电子密度梯度
本文研究了吡啶酸n -氧化物分子中O - h··O和甲巯咪唑超分子二聚体中N-H··S三中心相互作用下的费米交换空穴密度分布。提出了利用单电子静电力密度、单电子总静电力密度和电子密度梯度的矢量场内定义的鞍点和沉点作为探针电子位置的参考点。探针电子从共价键区重新分配到氢键区引起费米交换空穴的突然转变。交换空穴最初被限制在共价键内,随后扩大,包括氢键受体原子和一对氢键给体原子。这一现象强调了经典氢键固有的三中心特征。此外,在每个氢键的键线上,随着探针电子从一个鞍型平衡点跃迁到另一个鞍型平衡点,交换空穴密度的分布经历了一个平滑而稳定的变化,并遵循上述顺序。
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来源期刊
CiteScore
1.40
自引率
22.20%
发文量
252
审稿时长
2-4 weeks
期刊介绍: Russian Journal of General Chemistry is a journal that covers many problems that are of general interest to the whole community of chemists. The journal is the successor to Russia’s first chemical journal, Zhurnal Russkogo Khimicheskogo Obshchestva (Journal of the Russian Chemical Society ) founded in 1869 to cover all aspects of chemistry. Now the journal is focused on the interdisciplinary areas of chemistry (organometallics, organometalloids, organoinorganic complexes, mechanochemistry, nanochemistry, etc.), new achievements and long-term results in the field. The journal publishes reviews, current scientific papers, letters to the editor, and discussion papers.
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